Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq44 143 2e-29 seq88 141 8e-29 >seq44 Length=1445935 Score = 143 bits (158), Expect = 2e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||||| || | ||| |||||| || |||||||| || || | || || | || Sbjct 1049992 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTC 1050051 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| |||||||| |||| ||||||||||||| || | || ||||||||| Sbjct 1050052 CTCCAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 1050111 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | ||||||||| | |||||||| | || |||||| Sbjct 1050112 CTGGATCTTCGCCTTCACGTTATCGATCGTGTCGCTGGCCTCCACCTCGAGCGCGATCGT 1050171 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || ||||||| || ||||| || ||||||||| Sbjct 1050172 CTTGCCCGTCAGCGTCTTCACGAAGATCTGCATT 1050205 >seq88 Length=784127 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||||| || | ||| |||||| || |||||||| || || | || || | || Sbjct 682509 CAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTC 682450 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| |||||||| |||| ||||||||||||| || | || ||||||||| Sbjct 682449 CTCCAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 682390 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | ||||||||| | |||||||| | || |||||| Sbjct 682389 CTGGATCTTCGCCTTCACGTTATCGATCGTGTCGCTGGCCTCCACCTCGAGCGCGATCGT 682330 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 || ||||||| || ||||| || |||||||| || Sbjct 682329 CTTGCCCGTCAGCGTCTTCACGAAGATCTGCATCCT 682294 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||||| || | ||| |||||| || |||||||| || || | || || | || Sbjct 683014 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTC 682955 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| |||||||| |||| ||||||||||||| || | || ||||||||| Sbjct 682954 CTCCAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 682895 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | ||||||||| | |||||||| | || |||||| Sbjct 682894 CTGGATCTTCGCCTTCACGTTATCGATCGTGTCGCTGGCCTCCACCTCGAGCGCGATCGT 682835 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 || ||||||| || ||||| || |||||||| || Sbjct 682834 CTTGCCCGTCAGCGTCTTCACGAAGATCTGCATCCT 682799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793059047680