Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq11 159 3e-34 >seq11 Length=2034363 Score = 159 bits (176), Expect = 3e-34 Identities = 400/601 (67%), Gaps = 14/601 (2%) Strand=Plus/Minus Query 29872 CTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTC 29931 |||||||| | | |||| | ||||| || || || || ||| ||||||| | ||| Sbjct 206613 CTTCAGCGCTGCAACGTGGTTTTTGTAGATATGCGCATCCCCGAGGGTGTGGACGAGCTC 206554 Query 29932 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29991 ||| || | || ||| || | | || |||| || | || | |||| |||||| Sbjct 206553 TCCGGGCTTTAACCCCGTCGCCTTCGCGATCAGAATTGTCAAAAGGGCGTAGGAGGCGAT 206494 Query 29992 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT- 30050 |||||| || || || || ||||| || | || | |||||||||| ||||||||||| Sbjct 206493 GTTAAAAGGCACGCCAAGTCCCATATCGCAGGAGCGCTGGTAGAGCATACACGAGAGCTC 206434 Query 30051 CTCCGTCGC-----TCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 || |||||| ||||||| ||||| | | ||||| || || || ||||| Sbjct 206433 CTTCGTCGCCGGGTTCACGTAGAACTGTCCGAGAAGATGGCAGGGCGGGAGTGCCATTTT 206374 Query 30106 GCCCAAGTCTTTGGGGTTCCAGGCGCAC-ACGATGATGCGCCTGTCTTCTGGGTTGTTCC 30164 || | || ||||| || ||| | || || |||| ||| | ||| || || Sbjct 206373 ATGCAGAGCGGACGGATTCCACGC-CACGAAGAGCATCCGCCGGTCGTTTGGATTTGTCT 206315 Query 30165 TGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA 30224 ||| | |||||| || | | ||| ||||| ||| |||| ||||| || | Sbjct 206314 TGAGGGTCTCCACGATGTACTTGATCTGGTCCACGCCCTTCCCGTCGTAGTTCGCGCGGT 206255 Query 30225 TGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC-- 30282 || ||||||||| || |||||||||| |||||| || ||||| ||||| || || || Sbjct 206254 GGTTCGTGTACTCCGCACCGAAATGCCGCCACTGAAAGCCGTAAACCGGGCCGAGATCCA 206195 Query 30283 TC-CCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341 || |||| | | |||| || || | |||| | ||| | | ||| |||||| | | Sbjct 206194 TCTCCTCGTTCTCGTGC---AATCCGCGGCTGTCAAGAAAAGCGCGGGAGCCGTTGTCAT 206138 Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30401 ||||||| | ||||| || || ||| | |||||| || | | |||| Sbjct 206137 CCCAGATATGAACCCCTTTATCGCTTAGCAGCCGTGCGTTTGTCTCGCCGCGCAAAAACC 206078 Query 30402 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACT 30461 ||||||||||||| || | ||||||||| | ||||| ||||| | ||||| || Sbjct 206077 ACAGCAGCTCCTCGGAAACACCACGCCAAAAGACGCGTTTGGTGGTGAGCAAGGGAAGCT 206018 Query 30462 G 30462 | Sbjct 206017 G 206017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309924616832