Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 >seq11 Length=2034363 Score = 95.1 bits (104), Expect = 1e-14 Identities = 374/581 (64%), Gaps = 12/581 (2%) Strand=Plus/Plus Query 34221 TTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGT 34280 |||| |||| || || ||||| || | ||| || || ||||||||||||||||| Sbjct 206021 TTCCCTTGCTCACCACCAAACGCGTCTTTTGGCGTGGTGTTTCCGAGGAGCTGCTGTGGT 206080 Query 34281 TCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACG 34340 | || | || | || ||| | | ||| ||||| | |||||||| | Sbjct 206081 TTTTGCGCGGCGAGACAAACGCACGGCTGCTAAGCGATAAAGGGGTTCATATCTGGGATG 206140 Query 34341 CTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACT 34400 |||| || || | ||||| |||| || || || | |||||| || Sbjct 206141 ACAACGGCTCCCGCGCTTTTCTTGACAGCCGCGGATTGCACGAGAACGAGGAGATGGATC 206200 Query 34401 TGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT-CGGGGGAGCGAA 34459 | |||||||| ||||| || |||||| | || || || |||||||| || | || Sbjct 206201 TCGGCCCGGTTTACGGCTTTCAGTGGCGGCATTTCGGTGCGGAGTACACGAACCACCGC- 206259 Query 34460 GCGGACTATT-CGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518 ||| |||| ||||| |||| | ||||||| | ||||| | | || ||| | ||| Sbjct 206260 GCGAACTACGACGGGA-AGGGCGTGGACCAGATCAAGTACATCGTGGAGACCCTCAAGAC 206318 Query 34519 GAACCCTGATGACAGAAGGATCGTGAT-GTGCGCGTGGAACCCGAAGGATCTCCCTCTGA 34577 || || | ||| | |||| | | ||| |||||||| ||| | ||| | | | Sbjct 206319 AAATCCAAACGACCGGCGGATGCTCTTCGTG-GCGTGGAATCCGTCCGCTCTGCATAAAA 206377 Query 34578 TGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC------GCGAATGGGGAGC 34631 |||| ||||| || ||||| ||| | || |||||||| |||| ||||| Sbjct 206378 TGGCACTCCCGCCCTGCCATCTTCTCGGACAGTTCTACGTGAACCCGGCGACGAAGGAGC 206437 Query 34632 TGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTG 34691 | || || |||||| || || || | || ||||| | || ||||| || ||||| | Sbjct 206438 TCTCGTGTATGCTCTACCAGCGCTCCTGCGATATGGGACTTGGCGTGCCTTTTAACATCG 206497 Query 34692 CTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGC 34751 | ||||| || | || ||||||| | | |||||| || || |||| Sbjct 206498 CCTCCTACGCCCTTTTGACAATTCTGATCGCGAAGGCGACGGGGTTAAAGCCCGGAGAGC 206557 Query 34752 TGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCAC 34792 | || || || | |||||||||||||||||| |||||| Sbjct 206558 TCGTCCACACCCTCGGGGATGCGCATATCTACAAAAACCAC 206598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 374/581 (64%), Gaps = 12/581 (2%) Strand=Plus/Minus Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCC 6612 |||||| |||||||||||||||||| | || || || ||||| || || ||||| Sbjct 206598 GTGGTTTTTGTAGATATGCGCATCCCCGAGGGTGTGGACGAGCTCTCCGGGCTTTAACCC 206539 Query 6613 CACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCC 6672 | | | ||||||| || | || ||||| || ||||| || ||||| || Sbjct 206538 CGTCGCCTTCGCGATCAGAATTGTCAAAAGGGCGTAGGAGGCGATGTTAAAAGGCACGCC 206479 Query 6673 TAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC------ 6726 | ||||| || | || || || |||||| || || |||||| |||| Sbjct 206478 AAGTCCCATATCGCAGGAGCGCTGGTAGAGCATACACGAGAGCTCCTTCGTCGCCGGGTT 206419 Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 |||||||| || | ||| ||||| || ||||| ||||| | | ||| | ||| Sbjct 206418 CACGTAGAACTGTCCGAGAAGATGGCAGGGCGGGAGTGCCATTTTATGCAGAGCGGACGG 206359 Query 6787 GTTCCACGCGCAC-ATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCA 6845 |||||||| ||| | | |||| | ||| | || || ||| | ||| || | | Sbjct 206358 ATTCCACGC-CACGAAGAGCATCCGCCGGTCGTTTGGATTTGTCTTGAGGGTCTCCACGA 206300 Query 6846 CGTACTGCAGCTGGTCCGCTCCCTGTCCCG-AATAGTCCGCTTCGCTCCCCCG-ATACTC 6903 ||||| | ||||||| | |||| ||||| |||| ||| || | || ||||| Sbjct 206299 TGTACTTGATCTGGTCCACGCCCT-TCCCGTCGTAGTTCGC-GCGGTGGTTCGTGTACTC 206242 Query 6904 CGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGA 6963 ||| || || || | |||||| || ||||| |||||||| | || |||||| Sbjct 206241 CGCACCGAAATGCCGCCACTGAAAGCCGTAAACCGGGCCGAGATCCATCTCCTCGTTCTC 206182 Query 6964 TGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 | || || || |||| ||||| | || || |||| | |||||||| | ||||| Sbjct 206181 GTGCAATCCGCGGCTGTCAAGAAAAGCGCGGGAGCCGTTGTCATCCCAGATATGAACCCC 206122 Query 7024 CCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGAC 7083 ||| | | ||| || | || | || |||||||||||||||||| Sbjct 206121 TTTATCGCTTAGCAGCCGTGCGTTTGTCTCGCCGCGCAAAAACCACAGCAGCTCCTCGGA 206062 Query 7084 CACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAA 7124 || || ||| | || ||||| || || |||| |||| Sbjct 206061 AACACCACGCCAAAAGACGCGTTTGGTGGTGAGCAAGGGAA 206021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261862085120