Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq9 138 2e-27 >seq9 Length=527489 Score = 138 bits (152), Expect = 2e-27 Identities = 436/659 (66%), Gaps = 24/659 (4%) Strand=Plus/Plus Query 71749 ATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 71808 ||||| |||||||| | || || || || || || | || || || || |||| Sbjct 426842 ATAATCTCAGTGCATAAGTTGGAGCATTTAATCGTGCCAATATGTTTCTGGTTCGACTTT 426901 Query 71809 TTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATA 71868 ||||||||||||||||| || || || |||||| ||| ||||| ||||||| |||| | Sbjct 426902 TTGTTACACGCATCCTTGTAGAGCATGAACGGAACACCCGTTTCGATCTGAGTCTCTAAA 426961 Query 71869 ATCGCTTTCCAGACGACTCGAGCCTTTATTATA--TTCTTGTATCTCTTTTCTCTTTCGT 71926 || || ||| | | | || | || | | | || | |||| |||| ||| Sbjct 426962 ATGGCAAACCACAATTCCTGTGCTTGGATCGTGCGTACCCCCATATTTTTT-TCTT-CGT 427019 Query 71927 ATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAA-TCCAGGACATTCA 71985 | | || || ||||| || || | |||| |||| | || | ||| || || | Sbjct 427020 AACTTTCGTACAAGCGTTCAAAATCTT-TCCCATAGCAGTCGCTGAGTCCCGGGCA--CG 427076 Query 71986 TTC--GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAG 72043 | | ||| ||| | | ||| | | || ||||| || | |||||||||||||| Sbjct 427077 TGCAGGGATCCATTAGCGTCCAAGTTTTCTGATTCTTTACACGCTCCATAAAGAGATCAG 427136 Query 72044 GAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTT 72102 |||||||||| || || || ||||| | | | || ||||| || || || || Sbjct 427137 GAATCCAAAG-GCCGTAGAAGAGATCGCGCGCACGTTGATCCTCCTTACCCGTGTTACGC 427195 Query 72103 TTAAG-ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 72161 || || ||| | ||| | | ||| |||| |||||| || |||| |||||| || | | Sbjct 427196 TTCAGCATC-ACAAACTCGAAAATGTCAGCATGCCATGGCTCCAGGTATATCGCAAAGGC 427254 Query 72162 TCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 72221 ||| || ||| || |||||||| | ||| | |||||||| || |||| | || Sbjct 427255 GCCCTTGCGCTTGCCGCCACCCTGATCGACGTAGCGGGCGGTGTTGTTGAAAACACGCAG 427314 Query 72222 CATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 72281 ||| || | | ||||||||| | |||||| || |||| |||||||||||| | || Sbjct 427315 CATAGGCACGAGACCATTGGAGGTACCATTCGTACCGGCAATATAGCTTCCAGACGAGCG 427374 Query 72282 AATATTGCTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 72337 || || || || ||| || || || || ||| ||| ||| | ||| Sbjct 427375 GATGTT----ATGGACATGTAGCCCAATCCCACCAGCCGATTTGCTGATCACGGCGGTCT 427430 Query 72338 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAACA 72395 || | ||||| ||||||||||| || ||||| || |||| | || | |||||||| Sbjct 427431 CCTTCAGTGTATCGTAGATGCCCTCAATGCTATCCTCTTTCATAGCTACG-AGAAAACA 427488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138042284880