Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 >seq4 Length=877237 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||||| ||| |||||||| || |||||||| ||||||| ||| | | ||||| Sbjct 46814 CACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGTCCGCCAATGTGCGGCCCTCCTC 46755 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| || || || | || || | |||||||||| ||| | |||||| || || Sbjct 46754 CAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTG 46695 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 || ||| || || | ||| ||||||| | ||| |||| | || || || Sbjct 46694 GATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTCGACCTCGAGCGCGATCGTCTT 46635 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||||| | || || || || || ||||| Sbjct 46634 GCCTGTCAGTGTCTTCACGAAGATCTGCAT 46605 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||| | ||| |||||||| || |||||||| ||||||| ||| | | ||||| Sbjct 46586 CACCAGGTGTAGCGTGGACTCCTTCTGGATATTGTAGTCCGCCAATGTGCGGCCCTCCTC 46527 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| || || || | || || | |||||||||| ||| | |||||| || || Sbjct 46526 CAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTG 46467 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 || ||| || || | ||| ||||||| | ||| |||| | || || || Sbjct 46466 GATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTCGACCTCGAGCGCGATCGTCTT 46407 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCATTTTA 19045 ||||| | || || || || || |||||| || Sbjct 46406 GCCTGTCAGTGTCTTCACGAAGATCTGCATTGTA 46373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572102740372