Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq9 141 1e-28 >seq9 Length=527489 Score = 141 bits (156), Expect = 1e-28 Identities = 464/708 (66%), Gaps = 20/708 (3%) Strand=Plus/Plus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 || ||||| |||| || || || ||| || |||| || || | || |||||| Sbjct 426791 GCGACAGACGCCAAGTTGCACACCGCTGTTTCGTTAGGGGACGTGTACTCAATAATCTCA 426850 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 ||||| | || || || || || || | || || || || ||||||||||||| Sbjct 426851 GTGCATAAGTTGGAGCATTTAATCGTGCCAATATGTTTCTGGTTCGACTTTTTGTTACAC 426910 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 |||||||| || || ||||| ||| ||| ||||| ||||||| |||| ||| || | Sbjct 426911 GCATCCTTGTAGAGCATGAACGGAACACCCGTTTCGATCTGAGTCTCTAAAATGGCAAAC 426970 Query 62927 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTC----TTTTCTCTTTCGTATAGTGT 62982 || | | | || | || | ||| | | |||| | |||||| | Sbjct 426971 CACAATTCCTGTGCTTGGATCGTGC----GTACCCCCATATTTTTTTCTTCGTAACTTTC 427026 Query 62983 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC-AGTCCAGGACATTCATCC--GG 63039 ||||| ||||| || || | |||| | || | | ||||| || || | | | || Sbjct 427027 GTACAAGCGTTCAAAATCTT-TCCCATAGCAGTCGCTGAGTCCCGGGCA--CGTGCAGGG 427083 Query 63040 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63099 | ||| | || ||| | | || ||| || || | ||||||||||||||||||||| Sbjct 427084 ATCCATTAGCGTCCAAGTTTTCTGATTCTTTACACGCTCCATAAAGAGATCAGGAATCCA 427143 Query 63100 AAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG-A 63157 ||| || || || ||||| | | | || ||||| || || || || || || | Sbjct 427144 AAG-GCCGTAGAAGAGATCGCGCGCACGTTGATCCTCCTTACCCGTGTTACGCTTCAGCA 427202 Query 63158 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63217 || | ||| | | ||| |||| |||||| || |||| |||||| || | | || Sbjct 427203 TC-ACAAACTCGAAAATGTCAGCATGCCATGGCTCCAGGTATATCGCAAAGGCGCCCTTG 427261 Query 63218 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63277 || ||| || |||||||| | ||| | |||||||| || |||| | || ||| || Sbjct 427262 CGCTTGCCGCCACCCTGATCGACGTAGCGGGCGGTGTTGTTGAAAACACGCAGCATAGGC 427321 Query 63278 ATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTA 63337 | | ||||||||| |||||||| || || | |||||||||||| | || || ||| Sbjct 427322 ACGAGACCATTGGAGGTACCATTCGTACCGGCAATATAGCTTCCAGACGAGCGGATGTTA 427381 Query 63338 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 63397 | ||| || || || || ||| ||| ||| | ||| || | ||| Sbjct 427382 TGGACATGTAGCCCAATCCCACCAGCCGATTTGCTGATCACGGCGGTCTCCTTCAGTGTA 427441 Query 63398 TCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAACA 63444 || ||||||||||| || ||||| || |||| | || | |||||||| Sbjct 427442 TCGTAGATGCCCTCAATGCTATCCTCTTTCATAGCTACG-AGAAAACA 427488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630906984800