Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 7e-11 >seq4 Length=877237 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 |||||||| || || || ||||| |||| || || | ||| | |||| || ||| || Sbjct 46374 ACAATGCAGATCTTCGTGAAGACACTGACAGGCAAGACGATCGCGCTCGAGGTCGAGGCG 46433 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| ||||| || ||| || || || || ||||| || || Sbjct 46434 AGCGATACGATCGATAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 46493 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || || || ||||| || | || || | ||||| ||| || ||| Sbjct 46494 CAGCAGCGTCTGATCTTCGCAGGCAAGCAGCTGGAGGAGGGCCGCACATTGGCGGACTAC 46553 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || ||||||||||| | ||||| Sbjct 46554 AATATCCAGAAGGAGTCCACGCTACACCTGGTGCT 46588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327271196470