Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq16 154 3e-32 >seq16 Length=341705 Score = 154 bits (170), Expect = 3e-32 Identities = 186/253 (74%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| | || || || | ||| | || ||||| |||||||| | || || Sbjct 109471 ATCATCACGAATGCGGTCGACATCGAGCACGAGTTCATCTGCGACGCGCTGCCGGTACGT 109530 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||| |||||||| || || ||||| ||||||||||| || || || ||||| | Sbjct 109531 CTGATTGGGATGAACTCGGAGCTGATGGGTCAGTACATCGAGTTTGTCGCGGACCGTCTG 109590 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | ||||||||| | |||||| ||||| || | |||||||||| ||| |||||| Sbjct 109591 CTCGTTGCGCTTGGTGAAGAGAAATACTACAATTCGACAAACCCCTTTGACTTCATGGAG 109650 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 | || ||||| || || || || ||||||||||| ||| | ||| | || ||||| Sbjct 109651 ATGATCTCGCTGCAGGGTAAGACGAACTTCTTCGAGAAGAGGGTCGGCGAGTATCAGAAG 109710 Query 243742 CCTGGTGTGATGA 243754 | |||||||||| Sbjct 109711 GCGGGTGTGATGA 109723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878049970300