Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 2e-12 >seq4 Length=877237 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | ||| || || || || || ||||| || || | ||||| | || Sbjct 46588 AGCACCAGGTGTAGCGTGGACTCCTTCTGGATATTGTAGTCCGCCAATGTGCGGCCCTCC 46529 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | || || |||||||| || || ||||| || || || || Sbjct 46528 TCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCC 46469 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || || || || | | | ||| Sbjct 46468 TGGATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTCGACCTCGAGCGCGATCGTC 46409 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447 ||||| |||| || || ||||| || |||||| || Sbjct 46408 TTGCCTGTCAGTGTCTTCACGAAGATCTGCATTGTA 46373 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| | || | ||||| || || | ||| || || || || || ||||| || || Sbjct 46832 ACCGCCTCTCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGTCCGC 46773 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || ||||||||||| || | || || |||||||| || || || Sbjct 46772 CAATGTGCGGCCCTCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGG 46713 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | ||||| | || || || Sbjct 46712 AATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTCGAC 46653 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | | | |||||||| |||| || || ||||| || ||||| Sbjct 46652 CTCGAGCGCGATCGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCAT 46605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643938112720