Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq16 147 3e-30 >seq16 Length=341705 Score = 147 bits (162), Expect = 3e-30 Identities = 290/422 (69%), Gaps = 8/422 (2%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| ||||| ||||| |||| || || || |||||||| | || |||| Sbjct 109690 TCTTCTCGAAGAAGTTCGTCTTACCCTGCAGCGAGATCATCTCCATGAAGTCAAAGGGGT 109631 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 | || | ||| ||| || || || | |||| | ||| || ||||| | Sbjct 109630 TTGTCGAATTGTAGTATTTCTCTTCACCAAGCGCAACGAGCAGACGGTCCGCGACAAACT 109571 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 ||||||| || |||| |||| |||| ||||| | ||| | || || ||||| || Sbjct 109570 CGATGTACTGACCCATCAGCTCCGAGTTCATCCCAATCAGACGTACCGGCAGCGCGTCGC 109511 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 | | ||||| | ||| || |||||||| | || | |||| | || |||| || ||| Sbjct 109510 AGATGAACTCGTGCTCGATGTCGACCGCATTCGTGATGATCTCC-AG-CACGCGCG-ACC 109454 Query 159888 CCGGC---TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 |||| ||| | ||||||| | | | || || ||||||||||| ||||| || Sbjct 109453 GCGGCAACTTGTGCTTGATGTGGTGCGTGTAAAGCAGACACGCAAAGTCCGTGTGCAATC 109394 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 |||||||||| ||||| | |||||| | | | || |||||||| | || ||| | Sbjct 109393 CCTCGTCCCGTGAGATCAGCTCGTTACTGAAGGTCAGTCCCGGCATCACGCCGCGCTTCT 109334 Query 160005 TGAGCCAAAAAATGGCCGCAAAA-GCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 | ||||| || | | ||||||| | ||| ||| ||||| |||||||| || |||||| Sbjct 109333 TAAGCCAGAATA-GCGCGCAAAACGACCCGGAAAAGAAGATGCCCTCCACCGCTGCAAAC 109275 Query 160064 GC 160065 || Sbjct 109274 GC 109273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153828357280