Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 4e-15 >seq9 Length=527489 Score = 96.9 bits (106), Expect = 4e-15 Identities = 253/380 (67%), Gaps = 6/380 (2%) Strand=Plus/Plus Query 106270 AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 106329 |||||| ||| ||||||||||| ||||| | ||||| || | | | ||| Sbjct 426598 AATAAAAGTATCTGCGAGACCTTGGACACCTATTCCAATTGGGCGATAATTTACGTTACT 426657 Query 106330 CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGT 106389 | | |||||||| || ||||| | | || || || ||||| || || | ||| Sbjct 426658 TCTCCTTGCAGTCTCTACCGGATAGTAGGAATTATCGATCACGCGGTTCAGGTTGTAGGT 426717 Query 106390 AACAATCTTT-GTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCA--TT 106446 || ||||| || | ||| | || ||| | || ||| || | || ||||| || Sbjct 426718 TACT-TCTTTCGTTACTTCGTAGAGAAGTTCGTGATTAAAGGTCTGC-TC-CTTCACGTT 426774 Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 ||| | || ||||||| || ||||| ||||| || || || || | || Sbjct 426775 TACAAATCGCGGCAGGGCGACAGACGCCAAGTTGCACACCGCTGTTTCGTTAGGGGACGT 426834 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | ||| || || || |||||||| | |||||||| || | || || ||||| Sbjct 426835 GTACTCAATAATCTCAGTGCATAAGTTGGAGCATTTAATCGTGCCAATATGTTTCTGGTT 426894 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 ||||||||| ||||||||||||||||||||| | || ||||| || |||| | Sbjct 426895 CGACTTTTTGTTACACGCATCCTTGTAGAGCATGAACGGAACACCCGTTTCGATCTGAGT 426954 Query 106627 CTTGAGAATTGCCTTCCACA 106646 || | ||| || ||||| Sbjct 426955 CTCTAAAATGGCAAACCACA 426974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979782283120