Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 >seq4 Length=877237 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 24699 ATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAG 24758 |||| ||||||||||| | || || || || || || || || ||||||| || || | Sbjct 46372 ATACAATGCAGATCTTCGTGAAGACACTGACAGGCAAGACGATCGCGCTCGAGGTCGAGG 46431 Query 24759 CCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCG 24818 | | ||| || | || | || || |||||||| || || || || || || || | Sbjct 46432 CGAGCGATACGATCGATAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGG 46491 Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878 |||| || ||| ||||||| || || || ||||||||||| | | || | || | Sbjct 46492 ATCAGCAGCGTCTGATCTTCGCAGGCAAGCAGCTGGAGGAGGGCCGCACATTGGCGGACT 46551 Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 | || || || ||||| || || |||||| ||||| |||| |||| || ||| Sbjct 46552 ACAATATCCAGAAGGAGTCCACGCTACACCTGGTGCTGCGTCTGCGTGGTGGC 46604 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || ||||||| || || || | | Sbjct 46605 ATGCAGATCTTCGTGAAGACACTGACAGGCAAGACGATCGCGCTCGAGGTCGAGGCGAGC 46664 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| || || || || || || || ||||| Sbjct 46665 GATACGATCGATAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAG 46724 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||||||||| | | || | || || || Sbjct 46725 CAGCGTCTGATCTTCGCAGGCAAGCAGCTGGAGGAGGGCCGCACATTGGCGGACTACAAT 46784 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || || ||| ||||| Sbjct 46785 ATCCAGAAGGAGTCCACGCTGCACCTGGTG 46814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896823926640