Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020
14-02-26] 138 sequences; 17,780,869 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq4 86.0 4e-12
>seq4
Length=877237
Score = 86.0 bits (94), Expect = 4e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | ||||| ||||| ||| ||| || || || ||||| || |
Sbjct 46603 CCACCACGCAGACGCAGCACCAGGTGTAGCGTGGACTCCTTCTGGATATTGTAGTCCGCC 46544
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| |||||| | || |||| || || || || || |||| |||||||||||| | ||
Sbjct 46543 AATGTGCGGCCCTCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGGA 46484
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || || ||| ||| |||| || | || ||||| | || ||
Sbjct 46483 ATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACATTATCGATCGTATCGCTCGCCTCGAC 46425
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|| | || |||||| || ||||| | || || || ||||||||||| ||
Sbjct 46424 CTCGAGCGCGATCGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCATTGT 46374
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| ||||||| || | ||||| || || ||| ||| || || || ||||| || |
Sbjct 46832 ACCGCCTCTCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGTCCGC 46773
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| |||||| | || |||| || || || || || |||| |||||||||||| | ||
Sbjct 46772 CAATGTGCGGCCCTCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGG 46713
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || || || || ||| ||| |||| || | || ||||| | || |
Sbjct 46712 AATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACATTATCGATCGTATCGCTCGCCTCGA 46654
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || |||||| || ||||| | || || || |||||||||||
Sbjct 46653 CCTCGAGCGCGATCGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCAT 46605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703447160960
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |