Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4 141 8e-29 >seq4 Length=877237 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| |||| ||| |||||| || || ||||| || ||| Sbjct 46603 CCACCACGCAGACGCAGCACCAGGTGTAGCGTGGACTCCTTCTGGATATTGTAGTCCGCC 46544 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||||||||| || || || |||| |||||||| |||| ||| Sbjct 46543 AATGTGCGGCCCTCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGGA 46484 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||| ||| |||||| ||||| | | | | ||| ||||||| || ||| Sbjct 46483 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTCGACC 46424 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || | || |||||| || || |||| || ||||| || ||||||||| Sbjct 46423 TCGAGCGCGATCGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCATT 46376 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| || || ||||| || ||||| || || | || || Sbjct 46814 CACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGTCCGCCAATGTGCGGCCCTCCTC 46755 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || |||| |||||||| |||| |||| || |||||| ||| Sbjct 46754 CAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTG 46695 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||||| | | | | ||| ||||||| || ||||| | || |||||| || Sbjct 46694 GATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTCGACCTCGAGCGCGATCGTCTT 46635 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || ||||| || |||||||| Sbjct 46634 GCCTGTCAGTGTCTTCACGAAGATCTGCAT 46605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792822381040