Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq9 125 1e-23 >seq9 Length=527489 Score = 125 bits (138), Expect = 1e-23 Identities = 301/445 (68%), Gaps = 8/445 (2%) Strand=Plus/Plus Query 69588 ATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGG 69646 || ||| || || | |||||| ||||| ||||||||||| || || |||||||| | | Sbjct 427108 ATTCTTTACACGCTCCATAAAGAGATCAGGAATCCAAAG-GCCGTAGAAGAGATCGCGCG 427166 Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAG-ATCGAGAAACTCCATAATATCAGAA 69705 | | || || || || || || || || ||| | |||||| | ||| |||| | Sbjct 427167 CACGTTGATCCTCCTTACCCGTGTTACGCTTCAGCATC-ACAAACTCGAAAATGTCAGCA 427225 Query 69706 TGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATG 69765 |||||||| || || |||||||| | | | ||| || || || |||||||| | | Sbjct 427226 TGCCATGGCTCCAGGTATATCGCAAAGGCGCCCTTGCGCTTGCCGCCACCCTGATCGACG 427285 Query 69766 TATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTT 69825 || | ||| ||||| || | || | |||||| || | | |||||| || ||||||| Sbjct 427286 TAGCGGGCGGTGTTGTTGAAAACACGCAGCATAGGCACGAGACCATTGGAGGTACCATTC 427345 Query 69826 GTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCT 69885 || || | |||||| ||||| | ||| || ||| | | ||| || || || || Sbjct 427346 GTACCGGCAATATAGCTTCCAGACGAGCGGATGTTATGGACATGTAGCCCAATCCCACCA 427405 Query 69886 GCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCA 69945 ||| ||| ||| | || |||| ||| || || || ||||| |||||||| Sbjct 427406 GCCGATTTGCTGATCACGGCGGTCTCCTTCAGTGTATCGTAGATGCCCTCAATGCTATCC 427465 Query 69946 TCTATCAT-GTTAAGAAGAAAACAGCTAG-ACATTTGATGATGTATAGTTCCCGCATTAA 70003 ||| |||| | || | |||||||| | || |||||| | || || || | || | Sbjct 427466 TCTTTCATAGCTACG-AGAAAACA-CGAGCTCATTTGTGGCCGTGGCGTCCCGGAGTTGA 427523 Query 70004 ATAATGTAGGAGATGCGTGAGTGAA 70028 | | ||| || | ||||||||||| Sbjct 427524 AGAGTGTTGGTGTAGCGTGAGTGAA 427548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907615082320