Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq9 104 3e-17 >seq9 Length=527489 Score = 104 bits (114), Expect = 3e-17 Identities = 259/385 (67%), Gaps = 14/385 (4%) Strand=Plus/Plus Query 77999 CTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA-AATAGATCTCGGGTTC 78057 ||| || || | ||||||||||||||| ||||| || || || || ||||| || | | Sbjct 427111 CTTTACACGCTCCATAAAGAGATCAGGAATCCAAAG-GCCGTAGAAGAGATCGCGCGCAC 427169 Query 78058 TATGTTCTTCATTTCCTGTATT-CTTTTTAAGATCGAGAAACTCCATAATATCAGAATGC 78116 || || || || || || || | || | ||| | |||||| | ||| |||| |||| Sbjct 427170 GTTGATCCTCCTTACCCGTGTTACGCTTCAGCATC-ACAAACTCGAAAATGTCAGCATGC 427228 Query 78117 CATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATAT 78176 ||||| || || ||||| || | | || || || || |||||||| | || Sbjct 427229 CATGGCTCCAGGTATATCGCAAAGGCGCCCTTGCGCTTGCCGCCACCCTGATCGACGTAG 427288 Query 78177 CTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTT 78236 | ||||||||| || |||| | || ||| || | | ||| || || || ||||| || Sbjct 427289 CGGGCGGTGTTGTTGAAAACACGCAGCATAGGCACGAGACCATTGGAGGTACCATTCGTA 427348 Query 78237 CCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA----TATCCCTATTCCTCC 78292 || | |||||| |||||| | ||| || || ||||| || ||| || || || Sbjct 427349 CCGGCAATATAGCTTCCAGACGAGCGGATGTT----ATGGACATGTAGCCCAATCCCACC 427404 Query 78293 TGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTC 78352 ||| || || | ||| |||| |||||||||||| ||||| || || || Sbjct 427405 AGCCGATTTGCTGATCACGGCGGTCTCCTTCAGTGTATCGTAGATGCCCTCAATGCTATC 427464 Query 78353 ATCCATCAT-GTTAAGAAGAAAACA 78376 || |||| | || | |||||||| Sbjct 427465 CTCTTTCATAGCTACG-AGAAAACA 427488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667601696320