Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq9 107 3e-18 >seq9 Length=527489 Score = 107 bits (118), Expect = 3e-18 Identities = 257/381 (67%), Gaps = 6/381 (2%) Strand=Plus/Plus Query 76594 CTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA-AATAGATCTCGGGTTC 76652 ||| || || | ||||||||||||||| ||||| || || || || ||||| || | | Sbjct 427111 CTTTACACGCTCCATAAAGAGATCAGGAATCCAAAG-GCCGTAGAAGAGATCGCGCGCAC 427169 Query 76653 TACGTTCTTCATTTCCTGTATT-CTTTTTAAGATCTAGGAACTCCATAATATCAGAATGC 76711 | || || || || || || | || | ||| | ||||| | ||| |||| |||| Sbjct 427170 GTTGATCCTCCTTACCCGTGTTACGCTTCAGCATC-ACAAACTCGAAAATGTCAGCATGC 427228 Query 76712 CATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATAT 76771 ||||| || || |||||||| | | ||| || || || |||||||| | || Sbjct 427229 CATGGCTCCAGGTATATCGCAAAGGCGCCCTTGCGCTTGCCGCCACCCTGATCGACGTAG 427288 Query 76772 CTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTT 76831 | ||| ||||| || |||| | || ||| || | | || || || |||||||| || Sbjct 427289 CGGGCGGTGTTGTTGAAAACACGCAGCATAGGCACGAGACCATTGGAGGTACCATTCGTA 427348 Query 76832 CCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCC 76891 || | |||||| |||||| | | || || ||| | | ||| || || || || ||| Sbjct 427349 CCGGCAATATAGCTTCCAGACGAGCGGATGTTATGGACATGTAGCCCAATCCCACCAGCC 427408 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 ||| ||| | || |||| ||| || ||||||||||| || ||||| || Sbjct 427409 GATTTGCTGATCACGGCGGTCTCCTTCAGTGTATCGTAGATGCCCTCAATGCTATCCTCT 427468 Query 76952 ATCAT-GTTAAGAAGAAAACA 76971 |||| | || | |||||||| Sbjct 427469 TTCATAGCTACG-AGAAAACA 427488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933170188160