Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq4 168 1e-36 seq16 118 2e-21 >seq4 Length=877237 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || ||||| |||| |||| || || ||||| |||||||| || Sbjct 46603 CCACCACGCAGACGCAGCACCAGGTGTAGCGTGGACTCCTTCTGGATATTGTAGTCCGCC 46544 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | |||||||| ||||| || || || || || ||||||| ||| || || || ||| Sbjct 46543 AATGTGCGGCCCTCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGGA 46484 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || |||||||| || || || ||||||| || || || ||||| Sbjct 46483 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTCGACC 46424 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||| | ||||||||| || |||| ||||| ||||| ||||||||| Sbjct 46423 TCGAGCGCGATCGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCATT 46376 >seq16 Length=341705 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 |||||||| |||||||| | || ||||| || || ||||| | || || ||||| Sbjct 109501 GAGTTCATCTGCGACGCGCTGCCGGTACGTCTGATTGGGATGAACTCGGAGCTGATGGGT 109560 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| || || || || ||| | |||| ||||| || | |||||| || Sbjct 109561 CAGTACATCGAGTTTGTCGCGGACCGTCTGCTCGTTGCGCTTGGTGAAGAGAAATACTAC 109620 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 || || | |||||||| | || |||||| | || || || ||||| || || |||||| Sbjct 109621 AATTCGACAAACCCCTTTGACTTCATGGAGATGATCTCGCTGCAGGGTAAGACGAACTTC 109680 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||| ||| | ||| |||| ||||| | | | ||||| Sbjct 109681 TTCGAGAAGAGGGTCGGCGAGTATCAGAAGGCGGGTGT 109718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737349234252