Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4 141 7e-29 >seq4 Length=877237 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||||||| | | ||||||||| |||||| |||||| ||||| ||||| || || Sbjct 46831 CCGCCTCTCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGTCCGCC 46772 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 | | ||| | || ||||||||||| || || ||||||| |||||||||||| | || Sbjct 46771 AATGTGCGGCCCTCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGGGGGA 46712 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| |||||| ||||| | | || || ||| | || ||| Sbjct 46711 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTCGACC 46652 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | || |||||||| || || || |||||||||||||| |||||| Sbjct 46651 TCGAGCGCGATCGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCATG 46604 Score = 138 bits (152), Expect = 8e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||||||| |||||| |||||| ||||| ||||| || Sbjct 46607 CATGCCACCACGCAGACGCAGCACCAGGTGTAGCGTGGACTCCTTCTGGATATTGTAGTC 46548 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | | ||| | || ||||||||||| || || ||||||| |||||||||||| | Sbjct 46547 CGCCAATGTGCGGCCCTCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCCGG 46488 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| |||||| ||||| | | || || ||| | || Sbjct 46487 GGGAATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATCGTATCGCTCGCCTC 46428 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || |||||||| || || || |||||||||||||| ||||| Sbjct 46427 GACCTCGAGCGCGATCGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCAT 46377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989794541146