Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq8 140 7e-28 >seq8 Length=1060349 Score = 140 bits (154), Expect = 7e-28 Identities = 185/254 (73%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGT-CG 230444 ||||| || | || || || | ||| | ||||| ||||| || || | || ||| || Sbjct 1000935 ATCATCACGAATGCGGTGGACATCGAGCACGAGTTTATTTGCGATGCGTTGCC-TGTACG 1000993 Query 230445 CCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 | ||||| |||||| | || | ||||||||||||||||| || || || ||||| | Sbjct 1000994 TTTGATTGGGATGAACTCCGAGTTGATGGGACAGTACATCGAGTTTGTTGCGGACCGTCT 1001053 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | | |||| |||||| | || || |||||| ||| || || || | || ||||| Sbjct 1001054 TCTCATTGCGCTTGGTGAAGAAAAGCATTACAACGCTACAAATCCGTTCGACTTCATGGA 1001113 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | | || ||||||||||| ||||| ||||||||||| ||| | || | || ||||||| Sbjct 1001114 GATGATCTCGCTTCAAGGAAAGACTAACTTCTTCGAGAAGAGGGTTGGCGAGTATCAGAA 1001173 Query 230625 GCCTGGTGTGATGA 230638 |||||||||||| Sbjct 1001174 AGCTGGTGTGATGA 1001187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822861516920