Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq14 122 7e-23 seq7 104 2e-17 >seq14 Length=332912 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| ||||| ||||| ||||| || ||||| || || || Sbjct 28304 CCGCCACGCAGACGGAGGACCAAATGCAGGGTGGATTCCTTCTGGATGTTGTAATCGGCG 28245 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||| |||||||||||| |||| || | ||||||||| ||| Sbjct 28244 AGCGTGCGGCCCTCCTCCAACTGTTTGCCCGCGAAAATCAGGCGTTGCTGGTCCGGGGGG 28185 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| ||||| | || ||| Sbjct 28184 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTATCGCTGGCCTCGACC 28125 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | | || |||||||| || ||||| || || || || |||||||| Sbjct 28124 TCGAGCGCGATCGTCTTGCCCGTCAACGTCTTCACGAAGATCTGCATTTT 28075 >seq7 Length=1072466 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| ||||| | ||| |||| ||||| ||||| ||||| || || || || || || Sbjct 364044 CCCCCGCGCAGACGGAGGACCAAATGCAGGGTGGATTCCTTCTGGATATTGTAATCGGCG 364103 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||||| ||| |||||||| |||| || | ||| ||||| || Sbjct 364104 AGCGTGCGTCCCTCCTCCAACTGCTTGCCCGCGAAAATCAGGCGCTGTTGGTCAGGAGGG 364163 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||| ||||| | | | | ||||| | || ||| Sbjct 364164 ATGCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCAATCGTATCGCTGGCCTCGACC 364223 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | | || |||||||| || ||||| || || || || |||||||| Sbjct 364224 TCGAGCGCGATCGTCTTGCCCGTCAACGTCTTCACGAAAATCTGCATTTT 364273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258767712144