Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 6e-12 >seq1 Length=2329561 Score = 86.0 bits (94), Expect = 6e-12 Identities = 277/422 (66%), Gaps = 6/422 (1%) Strand=Plus/Minus Query 38017 ACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAA-ATCTTTGGTTCTATA 38075 ||||| |||||||| | |||||||| ||| || | ||||| || ||| | | | Sbjct 95974 ACGCGCTCCATAAAAAGATCAGGTATCCA-AAGCCCGTAAAAAAGATCACGCGCCCGCTG 95916 Query 38076 TTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGG 38135 || || ||||| ||| |||| | | ||| ||||| ||||| || ||||| || Sbjct 95915 ATCCTCCTTCCCGGTGTTCCGCTTTAACATGACAAACTCGAAAATATCCGCATGCCAGGG 95856 Query 38136 TTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAAC 38195 || | ||||| || | ||| ||| | ||| | ||||| |||| | ||| | | Sbjct 95855 CTCCAGATAAACCGCAAATGCCCCTTTGCGTTTGCCCCCTCCTTGATCGACATAACGTGC 95796 Query 38196 TGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGA 38255 ||||||||| | | | | ||| || || | || || || | ||||| | |||| Sbjct 95795 GGTGTTATTAAAAACCCGCAGCATCGGCACCAACCCGTTCGAAGTTCCGTTCGTCCCGGC 95736 Query 38256 TATATAAGTACCCTTAGCTCGTATATTACTTATCGA-CAATCCTATTCCACCTGCATGTT 38314 |||||| | || ||||| || || | | || || ||| || || ||||| || Sbjct 95735 GATATAACTTCCGGAGGCTCGAATGTTG-TGAACGTGCAGTCCAATCCCCCCTGC-TGCC 95678 Query 38315 TTGATATTAAAG-CGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTT 38373 ||| || | | | |||| | || || || || | || ||||| |||||||| ||||| Sbjct 95677 TTGCTAATCACGGCGCACTCCTTCAAAGTGTCGTAAATCCCTTCAATACTGTCCTCCTTC 95618 Query 38374 ATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTA 38433 || | || || ||| || | ||| || || || || ||||||||||| || || Sbjct 95617 ATCGCTATTAAAAAGCAGGAACTCATCTGCGGACGGGGGGTGCCGGCGTTAAACAACGTC 95558 Query 38434 GG 38435 || Sbjct 95557 GG 95556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524308048960