Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 5e-13 >seq8 Length=1060349 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/161 (73%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 52618 GAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttC-GGGTAGTTTTGCGGC 52676 || || ||| |||||||||| ||||| ||| | || ||||| |||| ||||| | | Sbjct 1000725 GAGCGCCTGATCGCGTTTGCAGCTGTGGAGGGTATCTTCTTTTCAGGGTCATTTTGTG-C 1000783 Query 52677 AATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGAT 52736 | | || | |||||| ||| | ||||| || || || || |||||||| |||| Sbjct 1000784 ACTGTTCTGGCTCAAAAAGCGCGGCGTGATGCCTGGGCTAACCTTCAGCAACGAACTGAT 1000843 Query 52737 ATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTGT 52777 |||||||| || || ||||||| || ||||||||||||| Sbjct 1000844 CTCGCGCGATGAGGGGTTGCACACGGACTTTGCGTGTTTGT 1000884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063479132800