Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=2329561 Score = 102 bits (112), Expect = 1e-16 Identities = 287/438 (66%), Gaps = 2/438 (0%) Strand=Plus/Minus Query 72019 TTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 72078 || || || | |||||| |||||||| |||||||| | ||| ||||| | | | Sbjct 95977 TTCACGCGCTCCATAAAAAGATCAGGTATCCAAAGCCCGTAAAAAAGATCACGCGCCCGC 95918 Query 72079 TGCTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 72137 || ||||| || || || ||| ||||| || || ||| | | |||||| | |||||| Sbjct 95917 TGATCCTCCTTCCCGGTGTTCCGCTTTAACAT-GACAAACTCGAAAATATCCGCATGCCA 95859 Query 72138 CGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 72197 || |||| || | || | | || |||||| ||||| ||||| | || | Sbjct 95858 GGGCTCCAGATAAACCGCAAATGCCCCTTTGCGTTTGCCCCCTCCTTGATCGACATAACG 95799 Query 72198 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCC 72257 |||||||||||| |||| | || ||| || | | || || || | || || ||||| Sbjct 95798 TGCGGTGTTATTAAAAACCCGCAGCATCGGCACCAACCCGTTCGAAGTTCCGTTCGTCCC 95739 Query 72258 GGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCAT 72317 || |||||| ||||| ||| ||||| ||| || || || || |||||||| Sbjct 95738 GGCGATATAACTTCCGGAGGCTCGAATGTTGTGAACGTGCAGTCCAATCCCCCCTGCTGC 95679 Query 72318 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 72377 || || | ||||| || || || || || || || || ||||| || ||| | Sbjct 95678 CTTGCTAATCACGGCGCACTCCTTCAAAGTGTCGTAAATCCCTTCAATACTGTCCTCCTT 95619 Query 72378 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 72437 ||| | || ||| ||| | ||| || |||| || || || ||||| || || Sbjct 95618 CATCGCTATTAAAAAGCAGGAACTCATCTGCGGACGGGGGGTGCCGGCGTTAAACAACGT 95559 Query 72438 AGGAGAAGCGTGCGTAAA 72455 || | ||||| || || Sbjct 95558 CGGGGTCGCGTGGGTGAA 95541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138495303840