Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq7 118 2e-21 seq14 86.0 1e-11 >seq7 Length=1072466 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| ||||| || || | || || | || || || | || || || Sbjct 364074 GTGGATTCCTTCTGGATATTGTAATCGGCGAGCGTGCGTCCCTCCTCCAACTGCTTGCCC 364133 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | |||||| |||||||| || ||||| || ||||||||||| || || Sbjct 364134 GCGAAAATCAGGCGCTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTC 364193 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||||| | || ||||| || | || ||||| || || | || Sbjct 364194 ACATTGTCAATCGTATCGCTGGCCTCGACCTCGAGCGCGATCGTCTTGCCCGTCAACGTC 364253 Query 104543 TTTACAAATATCTGCATTTTGTG 104565 || || || ||||||||||| || Sbjct 364254 TTCACGAAAATCTGCATTTTTTG 364276 >seq14 Length=332912 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || || || | || || | || || || | ||||| || Sbjct 28274 GTGGATTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCCTCCTCCAACTGTTTGCCC 28215 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | || || || || || || || || || ||||| ||||| || || Sbjct 28214 GCGAAAATCAGGCGTTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTC 28155 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||||| | || ||||| || | || ||||| || || | || Sbjct 28154 ACGTTGTCGATCGTATCGCTGGCCTCGACCTCGAGCGCGATCGTCTTGCCCGTCAACGTC 28095 Query 104543 TTTACAAATATCTGCATTTT 104562 || || || ||||||||||| Sbjct 28094 TTCACGAAGATCTGCATTTT 28075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397160807472