Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7 105 6e-18 >seq7 Length=1072466 Score = 105 bits (116), Expect = 6e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || |||||| || || || ||||| ||||| || || | ||| | |||| || ||| | Sbjct 364274 AAAAATGCAGATTTTCGTGAAGACGTTGACGGGCAAGACGATCGCGCTCGAGGTCGAGGC 364215 Query 25055 GTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 || || || || ||||| | || | ||| ||||| ||||| || || |||| Sbjct 364214 CAGCGATACGATTGACAATGTGAAGGCGAAGATTCAG-GACAAGGAAGGCATCCCTCCTG 364156 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||||||||| | ||||| || ||||| || || || || | ||||| | | ||||| Sbjct 364155 ACCAACAGCGCCTGATTTTCGCGGGCAAGCAGTTGGAGGAGGGACGCACGCTCGCCGATT 364096 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||| || || |||||||| || ||||| || || Sbjct 364095 ACAATATCCAGAAGGAATCCACCCTGCATTTGGTCCT 364059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327556380460