Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 2e-12 >seq7 Length=1072466 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 111183 AAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACC 111242 ||||||||| ||||| || || ||| |||| ||||| || || | | || || | Sbjct 364274 AAAAATGCAGATTTTCGTGAAGACGTTGACGGGCAAGACGATCGCGCTCGAGGTCGAGGC 364215 Query 111243 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111302 ||||||| | ||| | | || || || ||| ||||| |||||| | || || Sbjct 364214 CAGCGATACGATTGACAATGTGAAGGCGAAGATTCAGGACAAGGAAGGCATCCCTCCTGA 364155 Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111362 ||||| | || |||| |||||||| || ||||| || || | |||||||| Sbjct 364154 CCAACAGCGCCTGATTTTCGCGGGCAAGCAGTTGGAGGAGGGACGCACGCTCGCCGATTA 364095 Query 111363 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| || || ||||| || || ||||| || | ||||||||||| || Sbjct 364094 CAATATCCAGAAGGAATCCACCCTGCATTTGGTCCTCCGTCTGCGCGGGGG 364044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039566912800