Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7 118 2e-21 seq14 91.5 3e-13 >seq7 Length=1072466 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || ||||| || || || |||||||||||||| || || | || || || | |||| Sbjct 364068 TGCAGGGTGGATTCCTTCTGGATATTGTAATCGGCGAGCGTGCGTCCCTCCTCCAACTGC 364127 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || || || |||||||| ||||| |||||||| ||||| ||||| || Sbjct 364128 TTGCCCGCGAAAATCAGGCGCTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTC 364187 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || ||||| || || || || || || | | |||||| || ||| Sbjct 364188 GCCTTCACATTGTCAATCGTATCGCTGGCCTCGACCTCGAGCGCGATCGTCTTGCCCGTC 364247 Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142 || || || ||||| | ||||||| Sbjct 364248 AACGTCTTCACGAAAATCTGCATTT 364272 >seq14 Length=332912 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || ||||| || || || || ||||||||||| || || | || || || | ||| Sbjct 28280 TGCAGGGTGGATTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCCTCCTCCAACTGT 28221 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || || ||||| ||||| || || || || || ||||| || || || Sbjct 28220 TTGCCCGCGAAAATCAGGCGTTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTC 28161 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| ||||| || || || || || || || || | | |||||| || ||| Sbjct 28160 GCCTTCACGTTGTCGATCGTATCGCTGGCCTCGACCTCGAGCGCGATCGTCTTGCCCGTC 28101 Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142 || || || ||||| | ||||||| Sbjct 28100 AACGTCTTCACGAAGATCTGCATTT 28076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480405920428