Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 >seq1 Length=2329561 Score = 109 bits (120), Expect = 5e-19 Identities = 233/345 (68%), Gaps = 5/345 (1%) Strand=Plus/Minus Query 131740 AAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTT 131799 ||| || ||||| |||||||||||||| |||| ||| || || | ||| |||||||| || Sbjct 95882 AAACTCGAAAATATCCGCATGCCAGGGCTCCAGATAAACCGCAAATGCCCCTTTGCGTTT 95823 Query 131800 ---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAA 131856 || ||||||| |||| ||| | |||| || | || |||| ||| ||| |||| Sbjct 95822 GCCCCCTCCTTGATCGACATAACGTGCGGTGTTATTAAAAACCCGCAGCATCGGCACCAA 95763 Query 131857 ACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAAC 131916 ||||| | |||| || || | || || || || ||||| || |||||||| Sbjct 95762 CCCGTTCGAAGTTCCGTTCGTCCCGGCGATATAACTTCCGGAGGCTCGAATGTTGTGAAC 95703 Query 131917 GTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTAT 131975 || |||||||| || || || | || | || | ||||| | | | ||||| | Sbjct 95702 GTGCAGTCCAATCCCCCCTGCTGCCTTGCTA-ATCACGGCGCACTCCTTCAAAGTGTCGT 95644 Query 131976 AGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGT 132035 | || ||||| | |||||| | || | | ||||||||| || || ||| | Sbjct 95643 AAATCCCTTCAATACTGTCCTCCTTCATCGCTATTAAAAAGCAGGAACTCATCTGCGGAC 95584 Query 132036 GAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTaaaaa 132080 | |||||||| |||||| || ||| | ||||| || |||| Sbjct 95583 GGGGGGTGCCGGCGTTAAACAACGTCGGGGTCGCGTGGGTGAAAA 95539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933964973408