Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20
2014-03-12] 84 sequences; 18,129,152 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq8 82.4 9e-11
seq1 82.4 9e-11
>seq8
Length=1060349
Score = 82.4 bits (90), Expect = 9e-11
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863
||||| || |||| ||||| ||| |||||||||||||| || || || || || ||
Sbjct 1000725 GAGCGCCTGATCGCGTTTGCAGCTGTGGAGGGTATCTTCTTTTCAGGGTCATTTTGTGCA 1000784
Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923
| | |||||||| ||||| || | ||||| || || |||| |||||| || |||
Sbjct 1000785 CTGTTCTGGCTCAAAAAGCGCGGCGTGATGCCTGGGCTAACCTTCAGCAACGAACTGATC 1000844
Query 94924 TCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956
|| || || ||||| | ||| || ||||||
Sbjct 1000845 TCGCGCGATGAGGGGTTGCACACGGACTTTGCG 1000877
>seq1
Length=2329561
Score = 82.4 bits (90), Expect = 9e-11
Identities = 115/158 (73%), Gaps = 10/158 (6%)
Strand=Plus/Plus
Query 105790 GGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTA--TG 105847
|||||| || | |||||||| |||||||| | |||||||||| || ||| ||
Sbjct 97022 GGATGTGATCCAGATGGCCGCGGATCGTGGGAAGTACATTGATCAA--TCGCAGTCGTTG 97079
Query 105848 AATCTCTTCATGGAAAGTCCAACGATGTCCAAGC---TCTCTTCTATGCACATGTACAGT 105904
||||| || ||||||||||| | ||| || | | |||||||| | ||| |
Sbjct 97080 AATCTTTTTATGGAAAGTCCTTCC---TCCGGGCGTATTACGTCTATGCATTTCTACTGC 97136
Query 105905 TGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942
||| | ||||| ||||| ||||| ||||||||||||||
Sbjct 97137 TGGGAAAAGGGCCTCAAGACGGGCATGTATTACCTCCG 97174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260187576160
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |