Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq7 102 6e-17 >seq7 Length=1072466 Score = 102 bits (112), Expect = 6e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| || || | ||||| || |||||| | ||||| || || || Sbjct 364273 AAAATGCAGATTTTCGTGAAGACGTTGACGGGCAAGACGATCGCGCTCGAGGTCGAGGCC 364214 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | || || |||| ||| | || | || ||| ||||| ||||| | || || || Sbjct 364213 AGCGATACGATTGACAATGTGAAGGC-GAAGATTCAGGACAAGGAAGGCATCCCTCCTGA 364155 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||||| | || || || ||||| || |||| || | |||||| | | |||||| Sbjct 364154 CCAACAGCGCCTGATTTTCGCGGGCAAGCAGTTGGAGGAGGGACGCACGCTCGCCGATTA 364095 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || || || ||||| | ||||| || Sbjct 364094 CAATATCCAGAAGGAATCCACCCTGCATTTGGT 364062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009253962672