Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq8 123 2e-23 >seq8 Length=1060349 Score = 123 bits (136), Expect = 2e-23 Identities = 302/450 (67%), Gaps = 11/450 (2%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| ||| || || ||| || | ||| |||||||| ||||| || |||| | | Sbjct 1001182 ACACCAGCTTTCTGATACTCGCCAACCCTCTTCTCGAAGAAGTTAGTCTTTCCTTGAAGC 1001123 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTC-ACACTTTAG 4366 || || | ||||| || || |||||||| || ||||||||||| ||||| ||| || Sbjct 1001122 GAGATCATCTCCATGAAGTCGAACGGATTTGTAGCGTTGTAATGCTTTTCTTCAC-CAAG 1001064 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 || | || | ||||| || ||||| || || ||||| | ||| | ||| |||| || Sbjct 1001063 CGCAATGAGAAGACGGTCCGCAACAAACTCGATGTACTGTCCCATCAACTCGGAGTTCAT 1001004 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAA--AAACTCTTGTTCTATAGTTACGGCT 4484 ||||| || | ||||| | ||| || ||| |||||| || || || || || Sbjct 1001003 CCCAATCAAACGTACAGGCAACGC--ATCGCAAATAAACTCGTGCTCGATGTCCACCGCA 1000946 Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCA---AAC 4541 | ||||| || || | || | |||| || | || | || Sbjct 1000945 TTCGTGATGATCTCCAGCACACGCGACCGAGGTAGTTTGTTCTTGATGTGGTGAGAGTAC 1000886 Query 4542 AATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAA 4600 || ||||||||||| || ||||| || || || | || | ||||||||||| || Sbjct 1000885 AACAAACACGCAAAGTCCGTGTGCAACCCCTCATCGC-GCGAGATCAGTTCGTTGCTGAA 1000827 Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660 |||| || ||||| | || | |||||| ||||| || | || ||||||||| || Sbjct 1000826 GGTTAGCCCAGGCATCACGCCGCGCTTTTTGAGCCAGAACAGTGCACAAAATGACCCTGA 1000767 Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGC 4690 |||||| || || || || || |||||||| Sbjct 1000766 AAAGAAGATACCCTCCACAGCTGCAAACGC 1000737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049162807972