Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 >seq1 Length=2329561 Score = 123 bits (136), Expect = 3e-23 Identities = 264/389 (68%), Gaps = 4/389 (1%) Strand=Plus/Minus Query 77975 CATCAATGACCA-GTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATA 78033 |||||| | ||| ||| || || ||| || || | |||||| |||||||||||||| | Sbjct 96002 CATCAACGTCCACGTCCCC-TCGCTCTTCACGCGCTCCATAAAAAGATCAGGTATCCAAA 95944 Query 78034 GAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTT-TTTAAGATCG 78092 | | ||| ||||| || | | || || || || || || ||| ||||| || | Sbjct 95943 GCCCGTAAAAAAGATCACGCGCCCGCTGATCCTCCTTCCCGGTGTTCCGCTTTAACAT-G 95885 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 | |||||| | |||||| | |||||| || || ||||| | || | | || ||| Sbjct 95884 ACAAACTCGAAAATATCCGCATGCCAGGGCTCCAGATAAACCGCAAATGCCCCTTTGCGT 95825 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || ||||| ||||| | ||| | |||||||||||| |||| | || ||| || | Sbjct 95824 TTGCCCCCTCCTTGATCGACATAACGTGCGGTGTTATTAAAAACCCGCAGCATCGGCACC 95765 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 | ||||| || ||||| || || || | ||||||||||| || ||||| || | Sbjct 95764 AACCCGTTCGAAGTTCCGTTCGTCCCGGCGATATAACTTCCGGAGGCTCGAATGTTGTGA 95705 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 | | | || || || ||||| ||| || | ||||| ||||| || ||| Sbjct 95704 ACGTGCAGTCCAATCCCCCCTGCTGCCTTGCTAATCACGGCGCACTCCTTCAAAGTGTCG 95645 Query 78333 TAGATACCCTCTATACTGTCATCCATCAT 78361 || || || || |||||||| ||| |||| Sbjct 95644 TAAATCCCTTCAATACTGTCCTCCTTCAT 95616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668070597760