Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 3e-14 >seq5 Length=1237164 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || || || || |||||||||||||| ||||| | ||| | || ||| Sbjct 1116435 AGCACCAAATGCAGTGTGGATTCCTTTTGGATGTTGTAGTCGGCGAGAGTACGACCCTCT 1116494 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| || || || || |||| ||||||||| | | || || ||||| ||| Sbjct 1116495 TCCAACTGTTTGCCTGCAAAAATCAGCCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 1116554 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | |||| | |||||| ||||| | || || Sbjct 1116555 TGGATCTTCGCCTTTACGTTATCAATAGTGTCGCTAGCCTCTACCTCAAGCGCTATTGTC 1116614 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||||||||||| |||||| Sbjct 1116615 TTCCCTGTTAGCGTCTTCACGAAGATCTGCAT 1116646 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| || || || || |||||||||||||| ||||| | ||| | || || Sbjct 1116662 GAGCACCAAATGCAGTGTGGATTCCTTTTGGATGTTGTAGTCGGCGAGAGTACGACCCTC 1116721 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || | ||| || || || || |||| ||||||||| | | || || ||||| || Sbjct 1116722 CTCCAACTGTTTGCCTGCAAAAATCAGCCGCTGCTGGTCTGGGGGAATACCCTCCTTGTC 1116781 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || || | || | |||| | |||||| || || | || || Sbjct 1116782 TTGGATCTTCGCCTTTACGTTATCAATAGTGTCGCTAGCCTCTACCTCGAGCGCTATTGT 1116841 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106 || || || || ||||||||||||| |||||||| Sbjct 1116842 CTTCCCTGTTAGTGTCTTCACGAAGATCTGCATTT 1116876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819558200364