Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7 154 1e-32 >seq7 Length=1072466 Score = 154 bits (170), Expect = 1e-32 Identities = 180/239 (75%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 41628 CATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTAT 41687 ||||||| || ||||| ||||| | |||| |||||| ||| |||||||| || || | Sbjct 364037 CATCACCCCC-CCGCGCAGACGGAGGACCAAATGCAGGGTGGATTCCTTCTGGATATTGT 364095 Query 41688 AGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGT 41747 | |||| ||| ||||| | || || | ||||||||| ||||| |||||||||||||||| Sbjct 364096 AATCGGCGAGCGTGCGTCCCTCCTCCAACTGCTTGCCCGCGAAAATCAGGCGCTGTTGGT 364155 Query 41748 CCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTC 41806 | | || | || ||||||||| ||| | || || | || | | | || ||||| Sbjct 364156 CAGGAGGGATGCCTTCCTTGTCC-TGAATCTTCGCCTTCACATTGTCAATCGTATCGCTG 364214 Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | ||| ||||| | || ||||| || ||||||| |||||| |||||||||||||| || Sbjct 364215 GCCTCGACCTCGAGCGCGATCGTCTTGCCCGTCAACGTCTTCACGAAAATCTGCATTTT 364273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303514580800