Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq2056 104 2e-17 >seq2056 Length=801 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 99547 ACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCG 99606 ||||| |||| | ||| |||| || || || || ||||||| || |||| | ||| Sbjct 475 ACGGTCAGCGTCGCGTTCAGCATGAGGACACCCTGGTCCGCCCAGCTCTGCAGGTACCCG 534 Query 99607 TGCTGCGGCCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGG 99666 ||| ||||| || | ||||||| || || | || || ||| ||||| ||||| Sbjct 535 TGCGGCGGCGCCGCGAAGCCGGGGATGTCCTGCGCCAGCTCCTTGTACATGTTTCGGAGG 594 Query 99667 CTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGG 99726 |||||||| ||| || || | | |||| |||| ||| ||||| |||||||| | Sbjct 595 CTGGGCGGCGGCGGCACCCCCGGCTGCACGGAGAAGCACAGCCCGTGCGCCTGCCCCACG 654 Query 99727 CTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACGTCCTCGGGCGCCG 99778 |||||| ||||||||||| || | || ||||| || |||| ||| || Sbjct 655 TCGTGGTACGGGTCCTGGCCGAGCAGCACCACCTTCACCGCCTCCAGCGGCG 706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440828810442720