Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq2056 120 3e-22 >seq2056 Length=801 Score = 120 bits (132), Expect = 3e-22 Identities = 200/283 (71%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 94199 ACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCCG 94258 ||||||||||||| |||||||| || || || || ||||||| || |||| | ||| Sbjct 475 ACGGTCAGCGTCGCGTTCAGCATGAGGACACCCTGGTCCGCCCAGCTCTGCAGGTACCCG 534 Query 94259 TGGGCGGGCGCGG-GCAGCGTCGGGTACGTCGCCCGG-ACCGCCGCGAAGATGTTGGCCA 94316 || | ||||| | | ||| |||| | ||| || | | || | | ||||| | Sbjct 535 TGCGGCGGCGCCGCGAAGC--CGGGGATGTCCTGCGCCAGCTCCTTGTACATGTTTCGGA 592 Query 94317 GGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCCG 94376 |||| || || ||||||||| || | ||| |||| ||||||||| ||||| ||| Sbjct 593 GGCTGGGCGGCGGCGGCACCCCCGGCTGCACGGAGAAGCACAGCCCGTGCGCCTGCCCCA 652 Query 94377 GCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCTCGGGCGCCGTGAGGC 94436 ||||||||||||||||||||| | |||||||| || |||| ||| |||| || Sbjct 653 CGTCGTGGTACGGGTCCTGGCCGAGCAGCACCACCTTCACCGCCTCCAGCGGCGTGCGGT 712 Query 94437 GCGTCCAGGCGAACA-CGTCCTCGCGCGCGGGCAGCACCTCCT 94478 | | || ||| | | | | |||||| ||||||||||||| Sbjct 713 TCAGCGCGGTGAAGATCATGC-CGCGCGGCGGCAGCACCTCCT 754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458873929079520