Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq5816 116 5e-21 >seq5816 Length=4820 Score = 116 bits (128), Expect = 5e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 126208 TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTG 126267 |||||||| |||| || |||||| || ||||||||||||||| || || | |||| ||| Sbjct 2979 TCCTTGCCGCCCTGCAGCCGCGTACCGAACTGACCGTCCGGCCGCAGCAGCGGCACGTTG 2920 Query 126268 TTGGCTCCCACAAAGTCCTGCGCAAACTTGACAATGGTCTCGCACAGGTTCTGCTCGCCG 126327 ||| ||||| |||| |||||| | ||| || |||| | || ||||||||| Sbjct 2919 TTGCTCCCCACGAAGTTCTGCGCCATGCCGACGATCGTCTGGATGAGCGACTGCTCGCCA 2860 Query 126328 TGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGATAAACTCG 126387 || | |||| | | ||||| | |||||| ||| ||||||| | |||||||| || | Sbjct 2859 TGGTGGTAGGCAGAGTGCTCCGACACGTACCCGGACAGCTGCACCACCTTGATCGCCTTG 2800 Query 126388 GTCGAGTTG 126396 ||| |||| Sbjct 2799 GTCAGGTTG 2791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611294391267200