Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq6636 95.1 3e-14 >seq6636 Length=1250 Score = 95.1 bits (104), Expect = 3e-14 Identities = 186/275 (68%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 133943 GCATGGAATGTTGGTGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAGTCAA 134002 || |||||||| ||| || ||| |||| | || ||||| || ||| || ||| Sbjct 413 GCGTGGAATGTATCAGAAATAAATAGAATGGCGTTACCACCTTGCCATATATTATTCCAA 354 Query 134003 TTCTTCGTAAATGACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATTC 134062 |||| || | || ||| |||| ||| |||||||| | || ||| |||| Sbjct 353 TTCTATATAGCTAACAATAAACTATCTTGTCAAGTATATCAAAGAAGTGCCGATATATTT 294 Query 134063 TTAGGAGTACCATTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTT 134122 ||||| || || || || ||||| ||| ||||||| || | ||| |||| ||| Sbjct 293 TTAGGTGTTCCTTTTAATATTGCAAGCTATGCATTACTTACAAACATGATAGCTCAACAA 234 Query 134123 TGTGGGTTAGAAGTTGGTGAGTTTGTATGGATGGGTGGAGATGTTCACATTTATAAAAAT 134182 ||||| ||||| | ||||| || |||||| || |||||| ||| | ||||||||| Sbjct 233 TGTGGATTAGATATAGGTGAATTAATATGGACAGGAGGAGATTGTCATGTATATAAAAAT 174 Query 134183 CACGTAGAAGCAGTTCAGGAACAACTTTCACGTGA 134217 || ||| ||| | |||||||||||| || Sbjct 173 CATCTAGCGCAAGTAAACTTACAACTTTCACGAGA 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147402606872456