Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq6636 87.8 4e-12 >seq6636 Length=1250 Score = 87.8 bits (96), Expect = 4e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 38391 GCAGATACATTCTTGGGAGTTCCACTGAATATCACATCATATTCAGTACTCACTCATATG 38450 || |||| ||| || || ||||| | ||||| || ||| || |||| || | ||| Sbjct 305 GCCGATATATTTTTAGGTGTTCCTTTTAATATTGCAAGCTATGCATTACTTACAAACATG 246 Query 38451 ATAGCACAAATTACTGGATTAGAAGTTGGTGAATTTATCTGGAACGGTGGAGATTGTCAT 38510 ||||| ||| ||||||||| | |||||||| || |||| || |||||||||||| Sbjct 245 ATAGCTCAACAATGTGGATTAGATATAGGTGAATTAATATGGACAGGAGGAGATTGTCAT 186 Query 38511 ATTTACTTGAATCATATCGAACAAGTAAAAGAACAATTATCACGAGAT 38558 | || |||||| | | |||||||| |||| | ||||||||| Sbjct 185 GTATATAAAAATCATCTAGCGCAAGTAAACTTACAACTTTCACGAGAT 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106276537895264