Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq6636 147 1e-30 >seq6636 Length=1250 Score = 147 bits (162), Expect = 1e-30 Identities = 170/228 (75%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 37922 GCATTGCCACCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGT 37981 || || |||||||| |||| ||| ||||| |||| | ||| || |||||| ||| Sbjct 383 GCGTTACCACCTTGCCATATATTATTCCAATTCTATATAGCTAACAATAAACTATCTTGT 324 Query 37982 CAGTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTAT 38041 || |||||||| | ||||| ||| | || ||||||||||| |||||||||||||||||| Sbjct 323 CAAGTATATCAAAGAAGTGCCGATATATTTTTAGGTGTTCCTTTTAATATTGCAAGCTAT 264 Query 38042 GCGTTGCTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGG 38101 || || |||||| | || ||||| | ||||||||||||| | |||||||| | ||| Sbjct 263 GCATTACTTACAAACATGATAGCTCAACAATGTGGATTAGATATAGGTGAATTAATATGG 204 Query 38102 ACTGGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGCAAGCTAAA 38149 || || || | ||| | || | ||||| || | ||||| |||| Sbjct 203 ACAGGAGGAGATTGTCATGTATATAAAAATCATCTAGCGCAAG-TAAA 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248770870608676