Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq6636 93.3 9e-14 >seq6636 Length=1250 Score = 93.3 bits (102), Expect = 9e-14 Identities = 164/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 279317 ATGACGTTACCACCTTGTCATAGCTTTGTGCAATTTTGTGTAGTGCAAGGAAAACTAAGC 279376 ||| ||||||||||||| |||| || | ||||| | | ||| | |||||| Sbjct 386 ATGGCGTTACCACCTTGCCATATATTATTCCAATTCTATATAGCTAACAATAAACTATCT 327 Query 279377 TGTATTCTGCATCAACGCTCCGCTGATCTATTTTTAGGAGTTCCATTTAATATCAGTAGT 279436 ||| | ||||| | || ||| |||||||||| ||||| |||||||| || Sbjct 326 TGTCAAGTATATCAAAGAAGTGCCGATATATTTTTAGGTGTTCCTTTTAATATTGCAAGC 267 Query 279437 TACTCACTACTAACTCATATGATTGCACAAATTACTGGTTTAGATGTTGGTGAATTTATT 279496 || || |||| || | ||||| || ||| ||| |||||| | |||||||| || Sbjct 266 TATGCATTACTTACAAACATGATAGCTCAACAATGTGGATTAGATATAGGTGAATTAATA 207 Query 279497 TGGAATGGTGGTGATTGTCACATTTATAAAAACCACGTTGAACAAGTAAAAGAACAACT 279555 |||| || || |||||||| | |||||||| || | | |||||||| |||||| Sbjct 206 TGGACAGGAGGAGATTGTCATGTATATAAAAATCATCTAGCGCAAGTAAACTTACAACT 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1114988711990868