Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_025449.1 Length=166783 Score E Sequences producing significant alignments: (Bits) Value seq9001 91.5 2e-13 seq6075 91.5 2e-13 >seq9001 Length=11441 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 69748 GCTGGGAATAAAGGACTCGAACCTTTGCATCCTGGAATCAAAATCCAGTGCCTT-ACCAA 69806 |||||||| ||||| ||||||||| | || | ||||||||||||| ||||||| ||||| Sbjct 4794 GCTGGGAAGGAAGGATTCGAACCTTCGAATGCCGGAATCAAAATCCGGTGCCTTAACCAA 4735 Query 69807 CTTGGCTAATTCCCAATTATTA 69828 |||||| | ||||||||| ||| Sbjct 4734 CTTGGCGACTTCCCAATTTTTA 4713 >seq6075 Length=1526 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 69748 GCTGGGAATAAAGGACTCGAACCTTTGCATCCTGGAATCAAAATCCAGTGCCTT-ACCAA 69806 |||||||| ||||| ||||||||| | || | ||||||||||||| ||||||| ||||| Sbjct 375 GCTGGGAAGGAAGGATTCGAACCTTCGAATGCCGGAATCAAAATCCGGTGCCTTAACCAA 316 Query 69807 CTTGGCTAATTCCCAATTATTA 69828 |||||| | ||||||||| ||| Sbjct 315 CTTGGCGACTTCCCAATTTTTA 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533492414336160