Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq6636 102 5e-17 >seq6636 Length=1250 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 20000 TTACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAG 20059 |||||||||||||||| | |||| ||||||| | | | |||| ||||||| || Sbjct 380 TTACCACCTTGCCATATATTATTCCAATTCTATATAGCTAACAATAAACTATCTTGTCAA 321 Query 20060 TTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCT 20119 | |||||| ||||||| || |||| | |||||||| |||||||||||| ||||| Sbjct 320 GTATATCAAAGAAGTGCCGATATATTTTTAGGTGTTCCTTTTAATATTGCAAGCTATGCA 261 Query 20120 TTACTTACACACTTAGTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTTGGGTT 20179 ||||||||| || | | || | ||||||| | || | ||||| || | ||| Sbjct 260 TTACTTACAAACATGATAGCTCAACAATGTGGATTAGATATAGGTGAATTAATATGGACA 201 Query 20180 GGTGGTGATTGCCA 20193 || || ||||| || Sbjct 200 GGAGGAGATTGTCA 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318961543115372