Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5572 116 4e-21 seq4920 109 6e-19 seq4861 109 6e-19 seq9151 105 7e-18 seq8268 105 7e-18 seq5779 105 7e-18 seq6883 100 3e-16 >seq5572 Length=1533 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct 878 CCGCCGCGGAGGCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCCGCG 819 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || || | |||||||| || ||||| Sbjct 818 AGCGTGCGGCCCTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 759 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || || | |||||| || || || Sbjct 758 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGCCTCGACC 699 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || || || ||||| | ||| || ||||| || ||||| Sbjct 698 TCGAGGGCGATCGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 652 >seq4920 Length=845 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| |||||||| ||||| || ||||||||||| | | ||| | Sbjct 541 AGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 600 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| ||||| |||| |||||||| || || || ||||| || Sbjct 601 CCCTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCC 660 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| || || | Sbjct 661 TTGTCCTGGATCTTCGCCTTCACGCTCTCGATCGTGTCGCTCGCCTCCACCTCCAGGGCG 720 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| |||||||| Sbjct 721 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATTTGCAT 758 >seq4861 Length=995 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| |||||||| ||||| || ||||||||||| | | ||| | Sbjct 449 AGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 390 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| ||||| |||| |||||||| || || || ||||| || Sbjct 389 CCCTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCC 330 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| || || | Sbjct 329 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGGGCG 270 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| |||||||| Sbjct 269 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATTTGCAT 232 >seq9151 Length=6141 Score = 105 bits (116), Expect = 7e-18 Identities = 348/529 (66%), Gaps = 13/529 (2%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGA-CGCCGCCTT 7622 || |||||| | ||||||||||| | ||||| |||||| | ||| | || ||| || Sbjct 2270 CAGCACATGATCCTGCGCGTGGCGATTGGCATCCACGGCAAGGACCTGGAGCGCGTCC-- 2213 Query 7623 GGAA-ACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTG 7681 | || || ||| | ||||| | || |||||||| | ||||| | || Sbjct 2212 GCAACACATACATGCTCATGTCGCAGGGCTTCTTCACGCACGCCACCCCCACGCTCTTCA 2153 Query 7682 CCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741 ||| || || | ||| || || |||||| || || | | ||| || |||| Sbjct 2152 ACGCCGGTACCCCCAAGCCGCAGATGAGCTCGTGCTTCCTGGTCGCGATGAAGGACGACA 2093 Query 7742 GCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGC 7800 ||||||| ||||| ||| |||||||| || |||||| || ||| |||| ||| Sbjct 2092 GCATCGAGGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGG-CGGCTGGC 2034 Query 7801 GGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAAC 7860 || || || | | | || || | ||||| ||| ||| ||||| | ||||||| Sbjct 2033 GGCATTGGCATCCATATCCACAACATCCGCGCGGCCGGCAGCTACATCGCGGGCACCAAC 1974 Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920 || | | | ||| | ||| ||| | ||||||| || ||| ||| || | || Sbjct 1973 GGCACGTCGAACGGCCTCATGCCGATGATCCGCGTGTGGAACAACACGGCCCGCTACGTT 1914 Query 7921 GACCAGGGGGGA---AAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977 || ||||| || |||||||| |||||| ||||| || | |||||||||||||| Sbjct 1913 GATCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCATGTACCTCGAGCCGTGGCACGCC 1854 Query 7978 GACATTTACGCAGTGCTAAATC-TGCGTCGCAACATGGGTTGCGAAGA-CAGCAAAGCGC 8035 ||||| | || ||| | || || ||||||| || || || |||| |||| Sbjct 1853 GACATCTTCG-AGTTCCTGCTCATGAAGCGCAACACTGGCAAGGAGGACCAGC-GCGCGC 1796 Query 8036 GCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084 |||| || |||| || | ||| | || || || || |||| |||||| Sbjct 1795 GCGACCTCTTCTACGCGCTCTGGATCCCGGACCTCTTCATGAAGCGCGT 1747 >seq8268 Length=4088 Score = 105 bits (116), Expect = 7e-18 Identities = 348/529 (66%), Gaps = 13/529 (2%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGA-CGCCGCCTT 7622 || |||||| | ||||||||||| | ||||| |||||| | ||| | || ||| || Sbjct 2141 CAGCACATGATCCTGCGCGTGGCGATTGGCATCCACGGCAAGGACCTGGAGCGCGTCC-- 2084 Query 7623 GGAA-ACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTG 7681 | || || ||| | ||||| | || |||||||| | ||||| | || Sbjct 2083 GCAACACATACATGCTCATGTCGCAGGGCTTCTTCACGCACGCCACCCCCACGCTCTTCA 2024 Query 7682 CCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741 ||| || || | ||| || || |||||| || || | | ||| || |||| Sbjct 2023 ACGCCGGTACCCCCAAGCCGCAGATGAGCTCGTGCTTCCTGGTCGCGATGAAGGACGACA 1964 Query 7742 GCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGC 7800 ||||||| ||||| ||| |||||||| || |||||| || ||| |||| ||| Sbjct 1963 GCATCGAGGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGG-CGGCTGGC 1905 Query 7801 GGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAAC 7860 || || || | | | || || | ||||| ||| ||| ||||| | ||||||| Sbjct 1904 GGCATTGGCATCCATATCCACAACATCCGCGCGGCCGGCAGCTACATCGCGGGCACCAAC 1845 Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920 || | | | ||| | ||| ||| | ||||||| || ||| ||| || | || Sbjct 1844 GGCACGTCGAACGGCCTCATGCCGATGATCCGCGTGTGGAACAACACGGCCCGCTACGTT 1785 Query 7921 GACCAGGGGGGA---AAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977 || ||||| || |||||||| |||||| ||||| || | |||||||||||||| Sbjct 1784 GATCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCATGTACCTCGAGCCGTGGCACGCC 1725 Query 7978 GACATTTACGCAGTGCTAAATC-TGCGTCGCAACATGGGTTGCGAAGA-CAGCAAAGCGC 8035 ||||| | || ||| | || || ||||||| || || || |||| |||| Sbjct 1724 GACATCTTCG-AGTTCCTGCTCATGAAGCGCAACACTGGCAAGGAGGACCAGC-GCGCGC 1667 Query 8036 GCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084 |||| || |||| || | ||| | || || || || |||| |||||| Sbjct 1666 GCGACCTCTTCTACGCGCTCTGGATCCCGGACCTCTTCATGAAGCGCGT 1618 >seq5779 Length=2238 Score = 105 bits (116), Expect = 7e-18 Identities = 348/529 (66%), Gaps = 13/529 (2%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGA-CGCCGCCTT 7622 || |||||| | ||||||||||| | ||||| |||||| | ||| | || ||| || Sbjct 98 CAGCACATGATCCTGCGCGTGGCGATTGGCATCCACGGCAAGGACCTGGAGCGCGTCC-- 155 Query 7623 GGAA-ACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTG 7681 | || || ||| | ||||| | || |||||||| | ||||| | || Sbjct 156 GCAACACATACATGCTCATGTCGCAGGGCTTCTTCACGCACGCCACCCCCACGCTCTTCA 215 Query 7682 CCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741 ||| || || | ||| || || |||||| || || | | ||| || |||| Sbjct 216 ACGCCGGTACCCCCAAGCCGCAGATGAGCTCGTGCTTCCTGGTCGCGATGAAGGACGACA 275 Query 7742 GCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGC 7800 ||||||| ||||| ||| |||||||| || |||||| || ||| |||| ||| Sbjct 276 GCATCGAGGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGG-CGGCTGGC 334 Query 7801 GGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAAC 7860 || || || | | | || || | ||||| ||| ||| ||||| | ||||||| Sbjct 335 GGCATTGGCATCCATATCCACAACATCCGCGCGGCCGGCAGCTACATCGCGGGCACCAAC 394 Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920 || | | | ||| | ||| ||| | ||||||| || ||| ||| || | || Sbjct 395 GGCACGTCGAACGGCCTCATGCCGATGATCCGCGTGTGGAACAACACGGCCCGCTACGTT 454 Query 7921 GACCAGGGGGGA---AAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977 || ||||| || |||||||| |||||| ||||| || | |||||||||||||| Sbjct 455 GATCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCATGTACCTCGAGCCGTGGCACGCC 514 Query 7978 GACATTTACGCAGTGCTAAATC-TGCGTCGCAACATGGGTTGCGAAGA-CAGCAAAGCGC 8035 ||||| | || ||| | || || ||||||| || || || |||| |||| Sbjct 515 GACATCTTCG-AGTTCCTGCTCATGAAGCGCAACACTGGCAAGGAGGACCAGC-GCGCGC 572 Query 8036 GCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084 |||| || |||| || | ||| | || || || || |||| |||||| Sbjct 573 GCGACCTCTTCTACGCGCTCTGGATCCCGGACCTCTTCATGAAGCGCGT 621 >seq6883 Length=2519 Score = 100 bits (110), Expect = 3e-16 Identities = 339/516 (66%), Gaps = 13/516 (3%) Strand=Plus/Plus Query 7577 TGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGA-CGCCGCCTTGGAA-ACGTACCA 7634 ||||||||||| | ||||| |||||| | ||| | || ||| || | || || ||| Sbjct 7 TGCGCGTGGCGATTGGCATCCACGGCAAGGACCTGGAGCGCGTCC--GCAACACATACAT 64 Query 7635 AATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAA 7694 | ||||| | || |||||||| | ||||| | || ||| || || Sbjct 65 GCTCATGTCGCAGGGCTTCTTCACGCACGCCACCCCCACGCTCTTCAACGCCGGTACCCC 124 Query 7695 CGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCAT 7754 | ||| || || |||||| || || | | ||| || ||||||||||| ||||| Sbjct 125 CAAGCCGCAGATGAGCTCGTGCTTCCTGGTCGCGATGAAGGACGACAGCATCGAGGGCAT 184 Query 7755 TTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGA 7813 ||| |||||||| || |||||| || ||| |||| ||||| || || | Sbjct 185 CTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGG-CGGCTGGCGGCATTGGCATCC 243 Query 7814 ACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCG 7873 | | || || | ||||| ||| ||| ||||| | ||||||||| | | | || Sbjct 244 ATATCCACAACATCCGCGCGGCCGGCAGCTACATCGCGGGCACCAACGGCACGTCGAACG 303 Query 7874 GTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGA- 7932 | | ||| ||| | ||||||| || ||| ||| || | || || ||||| || Sbjct 304 GCCTCATGCCGATGATCCGCGTGTGGAACAACACGGCCCGCTACGTTGATCAGGGCGGCG 363 Query 7933 --AAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAG 7990 |||||||| |||||| ||||| || | |||||||||||||| ||||| | || || Sbjct 364 GTAAGCGCAAGGGCGCCTTCGCCATGTACCTCGAGCCGTGGCACGCCGACATCTTCG-AG 422 Query 7991 TGCTAAATC-TGCGTCGCAACATGGGTTGCGAAGA-CAGCAAAGCGCGCGATCTATTCTT 8048 | | || || ||||||| || || || |||| |||||||| || |||| Sbjct 423 TTCCTGCTCATGAAGCGCAACACTGGCAAGGAGGACCAGC-GCGCGCGCGACCTCTTCTA 481 Query 8049 CGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084 || | ||| | || || || || |||| |||||| Sbjct 482 CGCGCTCTGGATCCCGGACCTCTTCATGAAGCGCGT 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505317713145440