Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq9151 163 4e-35 seq8268 163 4e-35 seq5779 163 4e-35 seq6883 154 2e-32 seq5536 113 6e-20 >seq9151 Length=6141 Score = 163 bits (180), Expect = 4e-35 Identities = 673/1050 (64%), Gaps = 35/1050 (3%) Strand=Plus/Plus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGC 111111 || ||||| || || || || | || || || | ||| ||||| || | ||| || Sbjct 1240 TCTGCGAGGCCCTGCACGCCGAGGCCGATGGGGCGGTGGCGCATGTTGCTGCGCTCG-GC 1298 Query 111112 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 111171 ||||| ||||| || | |||| ||| ||||| ||||| || || | ||| | ||| Sbjct 1299 GGTCTCGACGGGGTAGTAGTTTCGGTCTATGACACGGTTGAGGTTGTAGGTGATCTCCTT 1358 Query 111172 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 111231 || | |||| || | | ||||| | |||| || ||| |||| | Sbjct 1359 CGTCACCTCATAGAGCCGCTGGTGGTCAAACTCGTTCTTCTCGCGGTTCACAAACTTGGA 1418 Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291 || ||||| || |||| ||||| || |||||||| ||||| |||||||| | || Sbjct 1419 CAGCGCGATCGAGGCCAGGTTGCACACCGCCGTCTCGTCCTTCGAGGTGTACTCGATGAT 1478 Query 111292 TTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT 111351 || || || | ||| || | ||| || || || | |||| ||||| ||| ||| Sbjct 1479 CTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTGCTGGTTCGACTTGGCGTT 1538 Query 111352 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGC 111411 ||| |||||||||||||||||| | ||| ||||| || |||| || | ||||| || Sbjct 1539 GCAGGCATCCTTGTAGAGCATGAACGGCACGCCCGTTTCGATCTGAGACTCCAGAATGGC 1598 Query 111412 CTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTG 111470 ||| | | | ||| |||| || || | || || |||| ||| |||||| Sbjct 1599 AAACCACAGCTCCTGCGCCTGG-ACGGTGCGGATGCCCATACCCTTCGCTTCGTACCCCT 1657 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 111530 |||||| || |||||||| || |||| ||| || || | | ||| || Sbjct 1658 CGTAGAGCTTCTCGAACTCCTCGCCGTGGCAGTCGCTGAGGCCGGGCGTCGTGTTGGGGT 1717 Query 111531 AGAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 | || | ||| ||| || | || || || ||||||||||| ||||| || ||||| Sbjct 1718 CCATGAGCGTCCACTTGCCCTCACTCTTC-ACGCGCTTCATGAAGAGGTCCGGGATCCAG 1776 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGC-CTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 || | | ||||| || | || || || || | ||||| | || | || Sbjct 1777 AGCGCGTAGAAGAGGTCGC----GCGCGCGCTGGTC--CTCCTTGCCAGTGTTGCGCTTC 1830 Query 111649 A-----AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | |||||||| | ||| || |||||||| ||||| || || | |||| | ||| Sbjct 1831 ATGAGCAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTACATGGCGAAGGCGCCC 1890 Query 111704 TTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 || || || || | |||| || ||||| || ||| ||| | ||||| | ||| Sbjct 1891 TTGCGCTTACCGCCGCCCTGATCAACGTAGCGGGCCGTGTTGTTCCACACGCGGATCATC 1950 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTA-TTG------GC 111813 || || | || | || || || || || || ||| || || || Sbjct 1951 GGCATGAGGCCGTTCGACGTGCCGTTGGTGCC-------CGCGATGTAGCTGCCGGCCGC 2003 Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 111873 | | | ||||| || || ||||| || |||||| ||| ||| || ||||| Sbjct 2004 GCGGATGTTGTGGATATGGATGCCAATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTC 2063 Query 111874 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 111933 | | || || | ||||| || | ||| ||| ||||| | |||| |||||||| Sbjct 2064 CTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGCGACCAGGAAGCACGA 2123 Query 111934 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 111993 | ||||||||| | || ||||| || |||||||| || || || ||||| |||| | Sbjct 2124 GCTCATCTGCGGCTTGGGGGTACCGGCGTTGAAGAGCGTGGGGGTGGCGTGCGTGAAGAA 2183 Query 111994 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053 || || ||||| |||||| | ||| || | ||| | ||||||||||| Sbjct 2184 GCCCTGCGACATGAGCATGTATGTGTTGCGGACGCGCTCCAGGTCCTTGCCGTGGATGCC 2243 Query 112054 GATTGCGACCCGCATGAACATGTACTGTGG 112083 || || || |||| || ||||| ||| || Sbjct 2244 AATCGCCACGCGCAGGATCATGTGCTGCGG 2273 >seq8268 Length=4088 Score = 163 bits (180), Expect = 4e-35 Identities = 673/1050 (64%), Gaps = 35/1050 (3%) Strand=Plus/Plus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGC 111111 || ||||| || || || || | || || || | ||| ||||| || | ||| || Sbjct 1111 TCTGCGAGGCCCTGCACGCCGAGGCCGATGGGGCGGTGGCGCATGTTGCTGCGCTCG-GC 1169 Query 111112 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 111171 ||||| ||||| || | |||| ||| ||||| ||||| || || | ||| | ||| Sbjct 1170 GGTCTCGACGGGGTAGTAGTTTCGGTCTATGACACGGTTGAGGTTGTAGGTGATCTCCTT 1229 Query 111172 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 111231 || | |||| || | | ||||| | |||| || ||| |||| | Sbjct 1230 CGTCACCTCATAGAGCCGCTGGTGGTCAAACTCGTTCTTCTCGCGGTTCACAAACTTGGA 1289 Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291 || ||||| || |||| ||||| || |||||||| ||||| |||||||| | || Sbjct 1290 CAGCGCGATCGAGGCCAGGTTGCACACCGCCGTCTCGTCCTTCGAGGTGTACTCGATGAT 1349 Query 111292 TTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT 111351 || || || | ||| || | ||| || || || | |||| ||||| ||| ||| Sbjct 1350 CTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTGCTGGTTCGACTTGGCGTT 1409 Query 111352 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGC 111411 ||| |||||||||||||||||| | ||| ||||| || |||| || | ||||| || Sbjct 1410 GCAGGCATCCTTGTAGAGCATGAACGGCACGCCCGTTTCGATCTGAGACTCCAGAATGGC 1469 Query 111412 CTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTG 111470 ||| | | | ||| |||| || || | || || |||| ||| |||||| Sbjct 1470 AAACCACAGCTCCTGCGCCTGG-ACGGTGCGGATGCCCATACCCTTCGCTTCGTACCCCT 1528 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 111530 |||||| || |||||||| || |||| ||| || || | | ||| || Sbjct 1529 CGTAGAGCTTCTCGAACTCCTCGCCGTGGCAGTCGCTGAGGCCGGGCGTCGTGTTGGGGT 1588 Query 111531 AGAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 | || | ||| ||| || | || || || ||||||||||| ||||| || ||||| Sbjct 1589 CCATGAGCGTCCACTTGCCCTCACTCTTC-ACGCGCTTCATGAAGAGGTCCGGGATCCAG 1647 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGC-CTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 || | | ||||| || | || || || || | ||||| | || | || Sbjct 1648 AGCGCGTAGAAGAGGTCGC----GCGCGCGCTGGTC--CTCCTTGCCAGTGTTGCGCTTC 1701 Query 111649 A-----AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | |||||||| | ||| || |||||||| ||||| || || | |||| | ||| Sbjct 1702 ATGAGCAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTACATGGCGAAGGCGCCC 1761 Query 111704 TTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 || || || || | |||| || ||||| || ||| ||| | ||||| | ||| Sbjct 1762 TTGCGCTTACCGCCGCCCTGATCAACGTAGCGGGCCGTGTTGTTCCACACGCGGATCATC 1821 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTA-TTG------GC 111813 || || | || | || || || || || || ||| || || || Sbjct 1822 GGCATGAGGCCGTTCGACGTGCCGTTGGTGCC-------CGCGATGTAGCTGCCGGCCGC 1874 Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 111873 | | | ||||| || || ||||| || |||||| ||| ||| || ||||| Sbjct 1875 GCGGATGTTGTGGATATGGATGCCAATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTC 1934 Query 111874 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 111933 | | || || | ||||| || | ||| ||| ||||| | |||| |||||||| Sbjct 1935 CTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGCGACCAGGAAGCACGA 1994 Query 111934 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 111993 | ||||||||| | || ||||| || |||||||| || || || ||||| |||| | Sbjct 1995 GCTCATCTGCGGCTTGGGGGTACCGGCGTTGAAGAGCGTGGGGGTGGCGTGCGTGAAGAA 2054 Query 111994 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053 || || ||||| |||||| | ||| || | ||| | ||||||||||| Sbjct 2055 GCCCTGCGACATGAGCATGTATGTGTTGCGGACGCGCTCCAGGTCCTTGCCGTGGATGCC 2114 Query 112054 GATTGCGACCCGCATGAACATGTACTGTGG 112083 || || || |||| || ||||| ||| || Sbjct 2115 AATCGCCACGCGCAGGATCATGTGCTGCGG 2144 >seq5779 Length=2238 Score = 163 bits (180), Expect = 4e-35 Identities = 673/1050 (64%), Gaps = 35/1050 (3%) Strand=Plus/Minus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGC 111111 || ||||| || || || || | || || || | ||| ||||| || | ||| || Sbjct 1128 TCTGCGAGGCCCTGCACGCCGAGGCCGATGGGGCGGTGGCGCATGTTGCTGCGCTCG-GC 1070 Query 111112 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 111171 ||||| ||||| || | |||| ||| ||||| ||||| || || | ||| | ||| Sbjct 1069 GGTCTCGACGGGGTAGTAGTTTCGGTCTATGACACGGTTGAGGTTGTAGGTGATCTCCTT 1010 Query 111172 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 111231 || | |||| || | | ||||| | |||| || ||| |||| | Sbjct 1009 CGTCACCTCATAGAGCCGCTGGTGGTCAAACTCGTTCTTCTCGCGGTTCACAAACTTGGA 950 Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291 || ||||| || |||| ||||| || |||||||| ||||| |||||||| | || Sbjct 949 CAGCGCGATCGAGGCCAGGTTGCACACCGCCGTCTCGTCCTTCGAGGTGTACTCGATGAT 890 Query 111292 TTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT 111351 || || || | ||| || | ||| || || || | |||| ||||| ||| ||| Sbjct 889 CTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTGCTGGTTCGACTTGGCGTT 830 Query 111352 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGC 111411 ||| |||||||||||||||||| | ||| ||||| || |||| || | ||||| || Sbjct 829 GCAGGCATCCTTGTAGAGCATGAACGGCACGCCCGTTTCGATCTGAGACTCCAGAATGGC 770 Query 111412 CTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTG 111470 ||| | | | ||| |||| || || | || || |||| ||| |||||| Sbjct 769 AAACCACAGCTCCTGCGCCTGG-ACGGTGCGGATGCCCATACCCTTCGCTTCGTACCCCT 711 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 111530 |||||| || |||||||| || |||| ||| || || | | ||| || Sbjct 710 CGTAGAGCTTCTCGAACTCCTCGCCGTGGCAGTCGCTGAGGCCGGGCGTCGTGTTGGGGT 651 Query 111531 AGAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 | || | ||| ||| || | || || || ||||||||||| ||||| || ||||| Sbjct 650 CCATGAGCGTCCACTTGCCCTCACTCTTC-ACGCGCTTCATGAAGAGGTCCGGGATCCAG 592 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGC-CTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 || | | ||||| || | || || || || | ||||| | || | || Sbjct 591 AGCGCGTAGAAGAGGTCGC----GCGCGCGCTGGTC--CTCCTTGCCAGTGTTGCGCTTC 538 Query 111649 A-----AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | |||||||| | ||| || |||||||| ||||| || || | |||| | ||| Sbjct 537 ATGAGCAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTACATGGCGAAGGCGCCC 478 Query 111704 TTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 || || || || | |||| || ||||| || ||| ||| | ||||| | ||| Sbjct 477 TTGCGCTTACCGCCGCCCTGATCAACGTAGCGGGCCGTGTTGTTCCACACGCGGATCATC 418 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTA-TTG------GC 111813 || || | || | || || || || || || ||| || || || Sbjct 417 GGCATGAGGCCGTTCGACGTGCCGTTGGTGCC-------CGCGATGTAGCTGCCGGCCGC 365 Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 111873 | | | ||||| || || ||||| || |||||| ||| ||| || ||||| Sbjct 364 GCGGATGTTGTGGATATGGATGCCAATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTC 305 Query 111874 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 111933 | | || || | ||||| || | ||| ||| ||||| | |||| |||||||| Sbjct 304 CTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGCGACCAGGAAGCACGA 245 Query 111934 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 111993 | ||||||||| | || ||||| || |||||||| || || || ||||| |||| | Sbjct 244 GCTCATCTGCGGCTTGGGGGTACCGGCGTTGAAGAGCGTGGGGGTGGCGTGCGTGAAGAA 185 Query 111994 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053 || || ||||| |||||| | ||| || | ||| | ||||||||||| Sbjct 184 GCCCTGCGACATGAGCATGTATGTGTTGCGGACGCGCTCCAGGTCCTTGCCGTGGATGCC 125 Query 112054 GATTGCGACCCGCATGAACATGTACTGTGG 112083 || || || |||| || ||||| ||| || Sbjct 124 AATCGCCACGCGCAGGATCATGTGCTGCGG 95 >seq6883 Length=2519 Score = 154 bits (170), Expect = 2e-32 Identities = 665/1040 (64%), Gaps = 35/1040 (3%) Strand=Plus/Minus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGC 111111 || ||||| || || || || | || || || | ||| ||||| || | ||| || Sbjct 1024 TCTGCGAGGCCCTGCACGCCGAGGCCGATGGGGCGGTGGCGCATGTTGCTGCGCTCG-GC 966 Query 111112 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 111171 ||||| ||||| || | |||| ||| ||||| ||||| || || | ||| | ||| Sbjct 965 GGTCTCGACGGGGTAGTAGTTTCGGTCTATGACACGGTTGAGGTTGTAGGTGATCTCCTT 906 Query 111172 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 111231 || | |||| || | | ||||| | |||| || ||| |||| | Sbjct 905 CGTCACCTCATAGAGCCGCTGGTGGTCAAACTCGTTCTTCTCGCGGTTCACAAACTTGGA 846 Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291 || ||||| || |||| ||||| || |||||||| ||||| |||||||| | || Sbjct 845 CAGCGCGATCGAGGCCAGGTTGCACACCGCCGTCTCGTCCTTCGAGGTGTACTCGATGAT 786 Query 111292 TTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT 111351 || || || | ||| || | ||| || || || | |||| ||||| ||| ||| Sbjct 785 CTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTGCTGGTTCGACTTGGCGTT 726 Query 111352 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGC 111411 ||| |||||||||||||||||| | ||| ||||| || |||| || | ||||| || Sbjct 725 GCAGGCATCCTTGTAGAGCATGAACGGCACGCCCGTTTCGATCTGAGACTCCAGAATGGC 666 Query 111412 CTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTG 111470 ||| | | | ||| |||| || || | || || |||| ||| |||||| Sbjct 665 AAACCACAGCTCCTGCGCCTGG-ACGGTGCGGATGCCCATACCCTTCGCTTCGTACCCCT 607 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 111530 |||||| || |||||||| || |||| ||| || || | | ||| || Sbjct 606 CGTAGAGCTTCTCGAACTCCTCGCCGTGGCAGTCGCTGAGGCCGGGCGTCGTGTTGGGGT 547 Query 111531 AGAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 | || | ||| ||| || | || || || ||||||||||| ||||| || ||||| Sbjct 546 CCATGAGCGTCCACTTGCCCTCACTCTTC-ACGCGCTTCATGAAGAGGTCCGGGATCCAG 488 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGC-CTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 || | | ||||| || | || || || || | ||||| | || | || Sbjct 487 AGCGCGTAGAAGAGGTCGC----GCGCGCGCTGGTC--CTCCTTGCCAGTGTTGCGCTTC 434 Query 111649 A-----AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | |||||||| | ||| || |||||||| ||||| || || | |||| | ||| Sbjct 433 ATGAGCAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTACATGGCGAAGGCGCCC 374 Query 111704 TTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 || || || || | |||| || ||||| || ||| ||| | ||||| | ||| Sbjct 373 TTGCGCTTACCGCCGCCCTGATCAACGTAGCGGGCCGTGTTGTTCCACACGCGGATCATC 314 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTA-TTG------GC 111813 || || | || | || || || || || || ||| || || || Sbjct 313 GGCATGAGGCCGTTCGACGTGCCGTTGGTGCC-------CGCGATGTAGCTGCCGGCCGC 261 Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 111873 | | | ||||| || || ||||| || |||||| ||| ||| || ||||| Sbjct 260 GCGGATGTTGTGGATATGGATGCCAATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTC 201 Query 111874 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 111933 | | || || | ||||| || | ||| ||| ||||| | |||| |||||||| Sbjct 200 CTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGCGACCAGGAAGCACGA 141 Query 111934 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 111993 | ||||||||| | || ||||| || |||||||| || || || ||||| |||| | Sbjct 140 GCTCATCTGCGGCTTGGGGGTACCGGCGTTGAAGAGCGTGGGGGTGGCGTGCGTGAAGAA 81 Query 111994 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053 || || ||||| |||||| | ||| || | ||| | ||||||||||| Sbjct 80 GCCCTGCGACATGAGCATGTATGTGTTGCGGACGCGCTCCAGGTCCTTGCCGTGGATGCC 21 Query 112054 GATTGCGACCCGCATGAACA 112073 || || || |||| || || Sbjct 20 AATCGCCACGCGCAGGATCA 1 >seq5536 Length=1685 Score = 113 bits (124), Expect = 6e-20 Identities = 355/542 (65%), Gaps = 6/542 (1%) Strand=Plus/Plus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGC 111111 || ||||| || || || || | || || || | ||| ||||| || | ||| || Sbjct 1035 TCTGCGAGGCCCTGCACGCCGAGGCCGATGGGGCGGTGGCGCATGTTGCTGCGCTCG-GC 1093 Query 111112 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 111171 ||||| ||||| || | |||| ||| ||||| ||||| || || | ||| | ||| Sbjct 1094 GGTCTCGACGGGGTAGTAGTTTCGGTCTATGACACGGTTGAGGTTGTAGGTGATCTCCTT 1153 Query 111172 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 111231 || | |||| || | | ||||| | |||| || ||| |||| | Sbjct 1154 CGTCACCTCATAGAGCCGCTGGTGGTCAAACTCGTTCTTCTCGCGGTTCACAAACTTGGA 1213 Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291 || ||||| || |||| ||||| || |||||||| ||||| |||||||| | || Sbjct 1214 CAGCGCGATCGAGGCCAGGTTGCACACCGCCGTCTCGTCCTTCGAGGTGTACTCGATGAT 1273 Query 111292 TTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT 111351 || || || | ||| || | ||| || || || | |||| ||||| ||| ||| Sbjct 1274 CTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTGCTGGTTCGACTTGGCGTT 1333 Query 111352 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGC 111411 ||| |||||||||||||||||| | ||| ||||| || |||| || | ||||| || Sbjct 1334 GCAGGCATCCTTGTAGAGCATGAACGGCACGCCCGTTTCGATCTGAGACTCCAGAATGGC 1393 Query 111412 CTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTG 111470 ||| | | | ||| |||| || || | || || |||| ||| |||||| Sbjct 1394 AAACCACAGCTCCTGCGCCTGG-ACGGTGCGGATGCCCATACCCTTCGCTTCGTACCCCT 1452 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 111530 |||||| || |||||||| || |||| ||| || || | | ||| || Sbjct 1453 CGTAGAGCTTCTCGAACTCCTCGCCGTGGCAGTCGCTGAGGCCGGGCGTCGTGTTGGGGT 1512 Query 111531 AGAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 | || | ||| ||| || | || || || ||||||||||| ||||| || ||||| Sbjct 1513 CCATGAGCGTCCACTTGCCCTCACTCTTC-ACGCGCTTCATGAAGAGGTCCGGGATCCAG 1571 Query 111590 AG 111591 || Sbjct 1572 AG 1573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627931734691200