Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq9001 86.0 2e-12 seq6075 86.0 2e-12 >seq9001 Length=11441 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 31254 TGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTA--C 31311 |||||| | || ||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 4796 TGGCTGGGAAGGAAGGATTCGAACCTTCGAATGCCGGAATCAAAATCCGGTGCCTTAACC 4737 Query 31312 CGCTTGGCGAC 31322 ||||||||| Sbjct 4736 AACTTGGCGAC 4726 >seq6075 Length=1526 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 31254 TGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTA--C 31311 |||||| | || ||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 377 TGGCTGGGAAGGAAGGATTCGAACCTTCGAATGCCGGAATCAAAATCCGGTGCCTTAACC 318 Query 31312 CGCTTGGCGAC 31322 ||||||||| Sbjct 317 AACTTGGCGAC 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138177439794168