Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq6636 158 1e-33 >seq6636 Length=1250 Score = 158 bits (174), Expect = 1e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126117 ATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAA 126176 || |||||||| | || | |||||||| || || | | | ||| ||||| ||||| Sbjct 208 ATTAATTCACCTATATCTAATCCACATTGTTGAGCTATCATGTTTGTAAGTAATGCATAG 267 Query 126177 CTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAA 126236 ||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 268 CTTGCAATATTAAAAGGAACACCTAAAAATATATCGGCACTTCTTTGATATACTTGACAA 327 Query 126237 TTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATT 126296 || |||| | || || ||||| || | | | |||||||||||||| |||||| Sbjct 328 GATAGTTTATTGTTAGCTATATAGAATTGGAATAATATATGGCAAGGTGGTAACGCCATT 387 Query 126297 GAATCGATTTCAGTAGGATTCCATGCTGAAACAAT 126331 || ||||| | |||||| |||||||| || Sbjct 388 CTATTTATTTCTGATACATTCCACGCTGAAACTAT 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408534798083804