Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_030925.1 Length=138081 Score E Sequences producing significant alignments: (Bits) Value seq6636 87.8 2e-12 >seq6636 Length=1250 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 46605 TGAGCGATTAAGTGAGTAAGTAAAGCATAGCTAGCTATATTGAAGGGTACACCTAAGAAA 46664 ||||| || | || |||||||| |||||||| || ||||| || || |||||||| || Sbjct 238 TGAGCTATCATGTTTGTAAGTAATGCATAGCTTGCAATATTAAAAGGAACACCTAAAAAT 297 Query 46665 AAATCTGACGATCTCTGATATAACTTACAGGATAGGGTGCCGTTATCTACATAGAACTGG 46724 | ||| | ||| ||||||| | ||| ||||| | |||| ||| |||||| ||| Sbjct 298 ATATCGGCACTTCTTTGATATACTTGACAAGATAGTTTATTGTTAGCTATATAGAATTGG 357 Query 46725 AACATAGTGTGGCAACTTGGTAAAGCTATTTCATCTAGTACACTAGGATTCCACGCTG 46782 || | | |||||| |||||| || ||| || || | | ||||||||||| Sbjct 358 AATAATATATGGCAAGGTGGTAACGCCATTCTATTTATTTCTGATACATTCCACGCTG 415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441660677613920