Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq6636 104 9e-18 >seq6636 Length=1250 Score = 104 bits (114), Expect = 9e-18 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 |||||||| | || ||||||| | |||||||||||||| ||||| | ||| || || Sbjct 386 ATGGCGTTACCACCTTGCCATATATTATTCCAATTCTATATAGCTAACAATAAACTATCT 327 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 || || | ||||| | |||||| || || || || ||||| ||||| ||||| ||| Sbjct 326 TGTCAAGTATATCAAAGAAGTGCCGATATATTTTTAGGTGTTCCTTTTAATATTGCAAGC 267 Query 52230 TATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTCATT 52289 ||| | || || || | |||| |||| | | ||| | ||| | |||||||| || Sbjct 266 TATGCATTACTTACAAACATGATAGCTCAACAATGTGGATTAGATATAGGTGAATTAATA 207 Query 52290 TGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAG 52329 ||||| || || || ||| | || || || ||| ||| Sbjct 206 TGGACAGGAGGAGATTGTCATGTATATAAAAATCATCTAG 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190067168614920